X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=utils%2Fgetdown%2Fbin%2Fjalview.sh;h=9281be2ce3037b4410057102e771996c1adcae2a;hb=3778008766299b5db71d77e8530a9c0fe9b6916d;hp=371bfcd4f50215f58467de0a30e21d9b4d707855;hpb=e63e442ec4eea069cb7caa4ebe0c7e6f04855c74;p=jalview.git

diff --git a/utils/getdown/bin/jalview.sh b/utils/getdown/bin/jalview.sh
index 371bfcd..9281be2 100755
--- a/utils/getdown/bin/jalview.sh
+++ b/utils/getdown/bin/jalview.sh
@@ -41,21 +41,19 @@ HEADLESS=0
 GUI=0
 HELP=0
 DEBUG=0
-for ARG in "${@}"; do
+for RAWARG in "${@}"; do
+  ARG="${RAWARG%%=*}"
   case "${ARG}" in
-    "--headless")
+    --headless|--output|--image|--structureimage)
       HEADLESS=1
       ;;
-    "--help")
+    --help|--help-*|--version)
       HELP=1
       ;;
-    --help-*)
-      HELP=1
-      ;;
-    "--gui")
+    --gui)
       GUI=1
       ;;
-    "--debug")
+    --debug)
       DEBUG=1
       ;;
   esac