X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=utils%2Fjalviewjs%2Fsite-resources%2Fexamples%2Funiref50.fa;fp=utils%2Fjalviewjs%2Fsite-resources%2Fexamples%2Funiref50.fa;h=6e6c670d45dc250da135ba28b8455c35546e1e53;hb=ec8f3cedf60fb1feed6d34de6b49f6bfa78b9dd8;hp=0000000000000000000000000000000000000000;hpb=056dad85a910551cc95e44d451a61f6b8c4dd35d;p=jalview.git diff --git a/utils/jalviewjs/site-resources/examples/uniref50.fa b/utils/jalviewjs/site-resources/examples/uniref50.fa new file mode 100644 index 0000000..6e6c670 --- /dev/null +++ b/utils/jalviewjs/site-resources/examples/uniref50.fa @@ -0,0 +1,60 @@ +>FER_CAPAA Ferredoxin +-----------------------------------------------------------ASYKVKLITPDGP +IEFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDV +TIETHKEAELVG- +>FER_CAPAN Ferredoxin, chloroplast precursor +MA------SVSATMISTSFMPRKPAVTSL-KPIPNVGE--ALFGLKS-A--NGGKVTCMASYKVKLITPDGP +IEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDV +TIETHKEAELVG- +>FER1_SOLLC Ferredoxin-1, chloroplast precursor +MA------SISGTMISTSFLPRKPAVTSL-KAISNVGE--ALFGLKS-G--RNGRITCMASYKVKLITPEGP +IEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYPKGDV +TIETHKEEELTA- +>Q93XJ9_SOLTU Ferredoxin I precursor +MA------SISGTMISTSFLPRKPVVTSL-KAISNVGE--ALFGLKS-G--RNGRITCMASYKVKLITPDGP +IEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGKFLDDDQEAAGFVLTCVAYPKCDV +TIETHKEEELTA- +>FER1_PEA Ferredoxin-1, chloroplast precursor +MATT---PALYGTAVSTSFLRTQPMPMSV-TTTKAFSN--GFLGLKT-SLKRGDLAVAMASYKVKLVTPDGT +QEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDV +VIETHKEEDLTA- +>Q7XA98_TRIPR Ferredoxin I +MATT---PALYGTAVSTSFMRRQPVPMSV-ATTTTTKAFPSGFGLKSVSTKRGDLAVAMATYKVKLITPEGP +QEFDCPDDVYILDHAEEVGIELPYSCRAGSCSSCAGKVVNGNVNQEDGSFLDDEQIEGGWVLTCVAFPTSDV +TIETHKEEELTA- +>FER1_MESCR Ferredoxin-1, chloroplast precursor +MAAT--TAALSGATMSTAFAPK--TPPMTAALPTNVGR--ALFGLKS-SASR-GRVTAMAAYKVTLVTPEGK +QELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDV +TIETHKEEELTA- +>FER1_SPIOL Ferredoxin-1, chloroplast precursor +MAAT--TTTMMG--MATTFVPKPQAPPMMAALPSNTGR--SLFGLKT-GSR--GGRMTMAAYKVTLVTPTGN +VEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDV +TIETHKEEELTA- +>FER3_RAPSA Ferredoxin, leaf L-A +-----------------------------------------------------------ATYKVKFITPEGE +QEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDV +TIETHREEDMV-- +>FER2_ARATH Ferredoxin-2, chloroplast precursor +MAST----ALSSAIVGTSFIRRSPAPISLRSLPSANTQ--SLFGLKS-GTARGGRVTAMATYKVKFITPEGE +LEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDV +TIETHKEEDIV-- +>FER_BRANA Ferredoxin +-----------------------------------------------------------ATYKVKFITPEGE +QEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDV +TIETHKEEELV-- +>FER1_ARATH Ferredoxin-1, chloroplast precursor +MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMATYKVKFITPEGE +QEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDV +VIETHKEEAIM-- +>Q93Z60_ARATH At1g10960/T19D16_12 +MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMATYKVKFITPEGE +QEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD------------------- +------------- +>FER1_MAIZE Ferredoxin-1, chloroplast precursor +MATVLGSPRAPAFFFSSSSLRAAPAPTAV--ALPAAKV--GIMGRSA-SSRR--RLRAQATYNVKLITPEGE +VELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDV +VIETHKEEELTGA +>O80429_MAIZE Ferredoxin +MAAT---------ALSMSILR---APPPCFSSPLRLRV--AVAKPLA-APMRRQLLRAQATYNVKLITPEGE +VELQVPDDVYILDFAEEEGIDLPFSCRAGSCSSCAGKVVSGSVDQSDQSFLNDNQVADGWVLTCAAYPTSDV +VIETHKEDDLL--