X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Findex-files%2Findex-3.html;fp=website%2Fdm_javadoc%2Findex-files%2Findex-3.html;h=0000000000000000000000000000000000000000;hb=5be600c3985aa7bcb8d8b51d77d773c76e6802bb;hp=9343b05198bd6217b37a8158d3732b0609dd5283;hpb=bc3346bd7c1c518fad867d4c60a53779e7516588;p=jabaws.git
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-D-Index
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-A C D E F G H I J L M N O P R S T U V W
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-- deepCleanSequence(String) -
-Static method in class compbio.data.sequence.SequenceUtil
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- Removes all special characters and digits as well as whitespace chars
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- DEFAULT_COLUMN_SCORE -
-Static variable in enum compbio.data.sequence.SMERFSConstraints
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- Default column scoring schema
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- DEFAULT_GAP_THRESHOLD -
-Static variable in enum compbio.data.sequence.SMERFSConstraints
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- Default gap threshold value for SMERFS algorithm
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-Static variable in enum compbio.data.sequence.SMERFSConstraints
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- Default window size value for SMERFS algorithm
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-Static variable in class compbio.data.sequence.SequenceUtil
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- A digit
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- DisorderMethod - Enum in compbio.data.sequence
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