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Overview  Package   Class  Use  Tree  Deprecated  Index  Help 
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- PREV CLASS  - NEXT CLASS - FRAMES   - NO FRAMES   -  - - - -
- SUMMARY: NESTED | ENUM CONSTANTS | FIELD | METHOD -DETAIL: ENUM CONSTANTS | FIELD | METHOD
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- -compbio.data.sequence -
-Enum ConservationMethod

-
-java.lang.Object
-  extended by java.lang.Enum<ConservationMethod>
-      extended by compbio.data.sequence.ConservationMethod
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-
All Implemented Interfaces:
Serializable, Comparable<ConservationMethod>
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public enum ConservationMethod
extends Enum<ConservationMethod>
- - -

-Enumeration listing of all the supported methods. -

- -

-

-
Author:
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Agnieszka Golicz & Peter Troshin
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-Enum Constant Summary
ARMON - -
-           
GERSTEIN - -
-           
JORES - -
-           
KABAT - -
-           
KARLIN - -
-           
LANDGRAF - -
-           
MIRNY - -
-           
NOT_LANCET - -
-           
SANDER - -
-           
SCHNEIDER - -
-           
SHENKIN - -
-           
SMERFS - -
-           
TAYLOR_GAPS - -
-           
TAYLOR_NO_GAPS - -
-           
THOMPSON - -
-           
VALDAR - -
-           
WILLIAMSON - -
-           
ZVELIBIL - -
-           
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-Method Summary
-static ConservationMethodgetMethod(String meth) - -
-           
-static ConservationMethodvalueOf(String name) - -
-          Returns the enum constant of this type with the specified name.
-static ConservationMethod[]values() - -
-          Returns an array containing the constants of this enum type, in -the order they are declared.
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Methods inherited from class java.lang.Enum
compareTo, equals, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
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Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait
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-Enum Constant Detail
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-KABAT

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-public static final ConservationMethod KABAT
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-JORES

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-public static final ConservationMethod JORES
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-SCHNEIDER

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-public static final ConservationMethod SCHNEIDER
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-SHENKIN

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-public static final ConservationMethod SHENKIN
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-GERSTEIN

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-public static final ConservationMethod GERSTEIN
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-TAYLOR_GAPS

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-public static final ConservationMethod TAYLOR_GAPS
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-TAYLOR_NO_GAPS

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-public static final ConservationMethod TAYLOR_NO_GAPS
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-ZVELIBIL

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-public static final ConservationMethod ZVELIBIL
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-KARLIN

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-public static final ConservationMethod KARLIN
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-ARMON

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-public static final ConservationMethod ARMON
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-THOMPSON

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-public static final ConservationMethod THOMPSON
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-NOT_LANCET

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-public static final ConservationMethod NOT_LANCET
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-MIRNY

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-public static final ConservationMethod MIRNY
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-WILLIAMSON

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-public static final ConservationMethod WILLIAMSON
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-LANDGRAF

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-public static final ConservationMethod LANDGRAF
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-SANDER

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-public static final ConservationMethod SANDER
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-VALDAR

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-public static final ConservationMethod VALDAR
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-SMERFS

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-public static final ConservationMethod SMERFS
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-Method Detail
- -

-values

-
-public static ConservationMethod[] values()
-
-
Returns an array containing the constants of this enum type, in -the order they are declared. This method may be used to iterate -over the constants as follows: -
-for (ConservationMethod c : ConservationMethod.values())
-    System.out.println(c);
-
-

-

- -
Returns:
an array containing the constants of this enum type, in -the order they are declared
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-valueOf

-
-public static ConservationMethod valueOf(String name)
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-
Returns the enum constant of this type with the specified name. -The string must match exactly an identifier used to declare an -enum constant in this type. (Extraneous whitespace characters are -not permitted.) -

-

-
Parameters:
name - the name of the enum constant to be returned. -
Returns:
the enum constant with the specified name -
Throws: -
IllegalArgumentException - if this enum type has no constant -with the specified name -
NullPointerException - if the argument is null
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-getMethod

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-public static ConservationMethod getMethod(String meth)
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Overview  Package   Class  Use  Tree  Deprecated  Index  Help 
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- PREV CLASS  - NEXT CLASS - FRAMES   - NO FRAMES   -  - - - -
- SUMMARY: NESTED | ENUM CONSTANTS | FIELD | METHOD -DETAIL: ENUM CONSTANTS | FIELD | METHOD
- - - -
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