X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Ffull_javadoc%2Fcompbio%2Fengine%2FAsyncExecutor.html;h=711873c110a8549be5f1cb04ca70921073ac3bb0;hb=5be600c3985aa7bcb8d8b51d77d773c76e6802bb;hp=b5f9af4d8b12dc74b134d9dabac8f19321964954;hpb=cb02e8a08893701386c270a8bf9d0f08b9cbc4db;p=jabaws.git

diff --git a/website/full_javadoc/compbio/engine/AsyncExecutor.html b/website/full_javadoc/compbio/engine/AsyncExecutor.html
index b5f9af4..711873c 100644
--- a/website/full_javadoc/compbio/engine/AsyncExecutor.html
+++ b/website/full_javadoc/compbio/engine/AsyncExecutor.html
@@ -2,12 +2,12 @@
 <!--NewPage-->
 <HTML>
 <HEAD>
-<!-- Generated by javadoc (build 1.6.0_14) on Wed Feb 17 16:46:49 GMT 2010 -->
+<!-- Generated by javadoc (build 1.6.0_24) on Fri Aug 12 14:32:35 BST 2011 -->
 <TITLE>
 AsyncExecutor
 </TITLE>
 
-<META NAME="date" CONTENT="2010-02-17">
+<META NAME="date" CONTENT="2011-08-12">
 
 <LINK REL ="stylesheet" TYPE="text/css" HREF="../../stylesheet.css" TITLE="Style">
 
@@ -126,7 +126,7 @@ An asynchronous executor engine, capable of running, cancelling,
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
 <CODE>&nbsp;boolean</CODE></FONT></TD>
-<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#cancelJob(java.lang.String)">cancelJob</A></B>(java.lang.String&nbsp;jobId)</CODE>
+<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#cancelJob(java.lang.String)">cancelJob</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</CODE>
 
 <BR>
 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Stop running job.</TD>
@@ -134,7 +134,7 @@ An asynchronous executor engine, capable of running, cancelling,
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
 <CODE>&nbsp;boolean</CODE></FONT></TD>
-<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#cleanup(java.lang.String)">cleanup</A></B>(java.lang.String&nbsp;jobId)</CODE>
+<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#cleanup(java.lang.String)">cleanup</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</CODE>
 
 <BR>
 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Remove all files and a job directory for a jobid.</TD>
@@ -142,7 +142,7 @@ An asynchronous executor engine, capable of running, cancelling,
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
 <CODE>&nbsp;<A HREF="../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
-<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String&nbsp;jobId)</CODE>
+<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</CODE>
 
 <BR>
 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Query the status of the job</TD>
@@ -150,22 +150,22 @@ An asynchronous executor engine, capable of running, cancelling,
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
 <CODE>&nbsp;<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>
-<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;jobId)</CODE>
+<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getResults(java.lang.String)">getResults</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</CODE>
 
 <BR>
 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Retrieve the results of the job.</TD>
 </TR>
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
-<CODE>&nbsp;java.lang.String</CODE></FONT></TD>
-<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getWorkDirectory(java.lang.String)">getWorkDirectory</A></B>(java.lang.String&nbsp;jobId)</CODE>
+<CODE>&nbsp;<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A></CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#getWorkDirectory(java.lang.String)">getWorkDirectory</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</CODE>
 
 <BR>
 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
 </TR>
 <TR BGCOLOR="white" CLASS="TableRowColor">
 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
-<CODE>&nbsp;java.lang.String</CODE></FONT></TD>
+<CODE>&nbsp;<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A></CODE></FONT></TD>
 <TD><CODE><B><A HREF="../../compbio/engine/AsyncExecutor.html#submitJob(compbio.engine.client.ConfiguredExecutable)">submitJob</A></B>(<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;&nbsp;executable)</CODE>
 
 <BR>
@@ -189,8 +189,8 @@ An asynchronous executor engine, capable of running, cancelling,
 <A NAME="submitJob(compbio.engine.client.ConfiguredExecutable)"><!-- --></A><H3>
 submitJob</H3>
 <PRE>
-java.lang.String <B>submitJob</B>(<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;&nbsp;executable)
-                           throws <A HREF="../../compbio/metadata/JobSubmissionException.html" title="class in compbio.metadata">JobSubmissionException</A></PRE>
+<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A> <B>submitJob</B>(<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;&nbsp;executable)
+                 throws <A HREF="../../compbio/metadata/JobSubmissionException.html" title="class in compbio.metadata">JobSubmissionException</A></PRE>
 <DL>
 <DD>Submits job for the execution
  Immediate execution is not guaranteed, this method puts the job in the queue. 
@@ -209,7 +209,7 @@ java.lang.String <B>submitJob</B>(<A HREF="../../compbio/engine/client/Configure
 <A NAME="getResults(java.lang.String)"><!-- --></A><H3>
 getResults</H3>
 <PRE>
-<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt; <B>getResults</B>(java.lang.String&nbsp;jobId)
+<A HREF="../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt; <B>getResults</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)
                                    throws <A HREF="../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></PRE>
 <DL>
 <DD>Retrieve the results of the job. Please not that current implementations of this method 
@@ -229,7 +229,7 @@ getResults</H3>
 <A NAME="getWorkDirectory(java.lang.String)"><!-- --></A><H3>
 getWorkDirectory</H3>
 <PRE>
-java.lang.String <B>getWorkDirectory</B>(java.lang.String&nbsp;jobId)</PRE>
+<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A> <B>getWorkDirectory</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</PRE>
 <DL>
 <DD><DL>
 <DT><B>Parameters:</B><DD><CODE>jobId</CODE> - unique job identifier
@@ -241,7 +241,7 @@ java.lang.String <B>getWorkDirectory</B>(java.lang.String&nbsp;jobId)</PRE>
 <A NAME="cleanup(java.lang.String)"><!-- --></A><H3>
 cleanup</H3>
 <PRE>
-boolean <B>cleanup</B>(java.lang.String&nbsp;jobId)</PRE>
+boolean <B>cleanup</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</PRE>
 <DL>
 <DD>Remove all files and a job directory for a jobid.
 <P>
@@ -255,7 +255,7 @@ boolean <B>cleanup</B>(java.lang.String&nbsp;jobId)</PRE>
 <A NAME="cancelJob(java.lang.String)"><!-- --></A><H3>
 cancelJob</H3>
 <PRE>
-boolean <B>cancelJob</B>(java.lang.String&nbsp;jobId)</PRE>
+boolean <B>cancelJob</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</PRE>
 <DL>
 <DD>Stop running job. Please not that this method does not guarantee to remove the job directory and files in it.
 <P>
@@ -269,7 +269,7 @@ boolean <B>cancelJob</B>(java.lang.String&nbsp;jobId)</PRE>
 <A NAME="getJobStatus(java.lang.String)"><!-- --></A><H3>
 getJobStatus</H3>
 <PRE>
-<A HREF="../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> <B>getJobStatus</B>(java.lang.String&nbsp;jobId)</PRE>
+<A HREF="../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> <B>getJobStatus</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;jobId)</PRE>
 <DL>
 <DD>Query the status of the job
 <P>
