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-Packages that use LimitExceededException | -|
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compbio.data.msa | -Web Service interfaces for JAva Bioinformatics Analysis Web Services. | -
compbio.metadata | -A meta-data model for multiple sequence alignment web services - Classes in this package have no dependencies to other sources in the project. | -
compbio.ws.server | -- |
-Uses of LimitExceededException in compbio.data.msa | -
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Methods in compbio.data.msa that throw LimitExceededException | -|
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- String |
-MsaWS.align(List<FastaSequence> sequences)
-
-- Align a list of sequences with default settings. |
-
- String |
-SequenceAnnotation.analize(List<FastaSequence> sequences)
-
-- Analyse the sequences. |
-
- String |
-MsaWS.customAlign(List<FastaSequence> sequences,
- List<Option<T>> options)
-
-- Align a list of sequences with options. |
-
- String |
-SequenceAnnotation.customAnalize(List<FastaSequence> sequences,
- List<Option<T>> options)
-
-- Analyse the sequences according to custom settings defined in options - list. |
-
- String |
-MsaWS.presetAlign(List<FastaSequence> sequences,
- Preset<T> preset)
-
-- Align a list of sequences with preset. |
-
- String |
-SequenceAnnotation.presetAnalize(List<FastaSequence> sequences,
- Preset<T> preset)
-
-- Analyse the sequences according to the preset settings. |
-
-Uses of LimitExceededException in compbio.metadata | -
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Methods in compbio.metadata that return LimitExceededException | -|
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-static LimitExceededException |
-LimitExceededException.newLimitExceeded(Limit<?> limit,
- List<FastaSequence> seqs)
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-Uses of LimitExceededException in compbio.ws.server | -
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Methods in compbio.ws.server that throw LimitExceededException | -||
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-static
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-WSUtil.align(List<FastaSequence> sequences,
- ConfiguredExecutable<T> confExec,
- org.apache.log4j.Logger logger,
- String callingMethod,
- Limit<T> limit)
-
-- |
-|
- String |
-AAConWS.analize(List<FastaSequence> sequences)
-
-- |
-|
- String |
-SequenceAnnotationService.analize(List<FastaSequence> sequences)
-
-- |
-|
- String |
-DisemblWS.customAnalize(List<FastaSequence> sequences,
- List<Option<Disembl>> options)
-
-- |
-|
- String |
-GlobPlotWS.customAnalize(List<FastaSequence> sequences,
- List<Option<GlobPlot>> options)
-
-- |
-|
- String |
-SequenceAnnotationService.customAnalize(List<FastaSequence> sequences,
- List<Option<T>> options)
-
-- |
-|
- String |
-DisemblWS.presetAnalize(List<FastaSequence> sequences,
- Preset<Disembl> preset)
-
-- |
-|
- String |
-GlobPlotWS.presetAnalize(List<FastaSequence> sequences,
- Preset<GlobPlot> preset)
-
-- |
-|
- String |
-IUPredWS.presetAnalize(List<FastaSequence> sequences,
- Preset<IUPred> preset)
-
-- |
-|
- String |
-SequenceAnnotationService.presetAnalize(List<FastaSequence> sequences,
- Preset<T> preset)
-
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