-IUPred -

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Ffull_javadoc%2Fcompbio%2Frunner%2Fdisorder%2FIUPred.html;fp=website%2Ffull_javadoc%2Fcompbio%2Frunner%2Fdisorder%2FIUPred.html;h=0000000000000000000000000000000000000000;hb=0bbebf27d045b1345bc042bdf24ef2e6808df251;hp=52643a921ae91f9010e32de36d8aa711ca1f2d06;hpb=5be600c3985aa7bcb8d8b51d77d773c76e6802bb;p=jabaws.git diff --git a/website/full_javadoc/compbio/runner/disorder/IUPred.html b/website/full_javadoc/compbio/runner/disorder/IUPred.html deleted file mode 100644 index 52643a9..0000000 --- a/website/full_javadoc/compbio/runner/disorder/IUPred.html +++ /dev/null @@ -1,401 +0,0 @@ - - - - - - -IUPred - - - - - - - - - - - - -

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- -compbio.runner.disorder -
-Class IUPred

-java.lang.Object
-  compbio.engine.client.SkeletalExecutable<IUPred>
-      compbio.runner.disorder.IUPred
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All Implemented Interfaces:: Executable<IUPred>

public class IUPred
extends SkeletalExecutable<IUPred>
extends SkeletalExecutable<IUPred>

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-iupred sequenceFile - - Maximum sequence length is 40000 chars. Single string length max is a 1000 - chars! -

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-Nested Class Summary
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Nested classes/interfaces inherited from interface compbio.engine.client.Executable
Executable.ExecProvider
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-Field Summary
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Fields inherited from class compbio.engine.client.SkeletalExecutable
ERROR, INPUT, OUTPUT
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-Constructor Summary
IUPred() - -
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-Method Summary
- String getOutput() - -
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- ScoreManager getResults(String workDirectory) - -
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- Class<IUPred> getType() - -
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- IUPred setInput(String inFile) - -
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- IUPred setOutput(String outFile) - -
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Methods inherited from class compbio.engine.client.SkeletalExecutable
addParameters, equals, getClusterCpuNum, getClusterJobSettings, getCreatedFiles, getError, getInput, getLimit, getLimits, getParameters, hashCode, loadRunConfiguration, setError, setParameter, toString
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Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait
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Nested classes/interfaces inherited from interface compbio.engine.client.Executable
`Executable.ExecProvider`

Fields inherited from class compbio.engine.client.SkeletalExecutable
`ERROR, INPUT, OUTPUT`

-Constructor Summary
`IUPred()` - - -

-Method Summary
- `String`	`getOutput()` - - -
- `ScoreManager`	`getResults(String workDirectory)` - - -
- `Class<IUPred>`	`getType()` - - -
- `IUPred`	`setInput(String inFile)` - - -
- `IUPred`	`setOutput(String outFile)` - - -

Methods inherited from class compbio.engine.client.SkeletalExecutable
`addParameters, equals, getClusterCpuNum, getClusterJobSettings, getCreatedFiles, getError, getInput, getLimit, getLimits, getParameters, hashCode, loadRunConfiguration, setError, setParameter, toString`

Methods inherited from class java.lang.Object
`getClass, notify, notifyAll, wait, wait, wait`

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-Constructor Detail
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-IUPred

-public IUPred()

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-Method Detail

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-getResults

-public ScoreManager getResults(String workDirectory)
-                        throws ResultNotAvailableException

Throws: -: ResultNotAvailableException

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-setInput

-public IUPred setInput(String inFile)

Overrides:: setInput in class SkeletalExecutable<IUPred>

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-setOutput

-public IUPred setOutput(String outFile)

Overrides:: setOutput in class SkeletalExecutable<IUPred>

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-getOutput

-public String getOutput()

Specified by:: getOutput in interface Executable<IUPred>
Overrides:: getOutput in class SkeletalExecutable<IUPred>

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-getType

-public Class<IUPred> getType()

Specified by:: getType in class SkeletalExecutable<IUPred>

Returns:: subclasses must return their type

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