-compbio.runner.disorder -

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-Package compbio.runner.disorder -

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-Class Summary
Disembl	DisEMBL.py smooth_frame peak_frame join_frame fold_coils fold_hotloops - fold_rem465 sequence_file print - - 'A default run would be: ./DisEMBL.py 8 8 4 1.2 1.4 1.2 fasta_file > out' - - This version of DisEMBL is 1.4 (latest available for download in Feb 2011) - capable of outputting raw values - - The values of the parameters are hard coded in DisEMBL.py script.
GlobPlot	./GlobPipe.py SmoothFrame DOMjoinFrame DOMpeakFrame DISjoinFrame DISpeakFrame - - FASTAfile' Optimised for ELM: ./GlobPlot.py 10 8 75 8 8 sequence_file' - Webserver settings: ./GlobPlot.py 10 15 74 4 5 sequence_file' - - Hard-coded values are 10 15 74 4 5.
IUPred	iupred sequenceFile - - Maximum sequence length is 40000 chars.
Jronn	Command line - - java -Xmx512 -jar jronn_v3.jar -i=test_seq.txt -n=1 -o=out.txt -s=stat.out

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