+O-Index +

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Ffull_javadoc%2Findex-files%2Findex-15.html;fp=website%2Ffull_javadoc%2Findex-files%2Findex-15.html;h=b498f7d8f13e85877a2a66036b3b1eb9b43f6a47;hb=da8c820a7fb2edecb190589f3dc9c362e57a2f24;hp=0000000000000000000000000000000000000000;hpb=0bbebf27d045b1345bc042bdf24ef2e6808df251;p=jabaws.git diff --git a/website/full_javadoc/index-files/index-15.html b/website/full_javadoc/index-files/index-15.html new file mode 100644 index 0000000..b498f7d --- /dev/null +++ b/website/full_javadoc/index-files/index-15.html @@ -0,0 +1,164 @@ + + + + + + +O-Index + + + + + + + + + + + + +

+ + + + + + + + + + + + + + + +

+ + + + + + + + + + + + +

Overview

Package

Class

Use

Tree

Deprecated

Index

Help

+ +

+ PREV LETTER + NEXT LETTER

+ FRAMES + NO FRAMES + + + + +

+ + + +A B C D E F G H I J K L M N O P R S T U V W _

+O

OB - Class in compbio.runner._impl: TODO this needs fixing! Executable does not work
OB() - +Constructor for class compbio.runner._impl.OB +: +
OB(String) - +Constructor for class compbio.runner._impl.OB +: +
openInputStream(String) - +Static method in class compbio.data.sequence.SequenceUtil +: Reads and parses Fasta or Clustal formatted file into a list of + FastaSequence objects +
Option<T> - Class in compbio.metadata: Command line option/flag or multiple exclusive options with no value.
Option(String, String) - +Constructor for class compbio.metadata.Option +: +
OptionCombinator - Class in compbio.runner: This class solve the following problems.
OptionCombinator(RunnerConfig<? extends Executable<?>>) - +Constructor for class compbio.runner.OptionCombinator +: +
optionsToCommandString(List<Option<?>>) - +Method in class compbio.runner.OptionCombinator +: +
OUTPUT - +Static variable in class compbio.engine.client.SkeletalExecutable +: +