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X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Ffull_javadoc%2Findex-files%2Findex-22.html;fp=website%2Ffull_javadoc%2Findex-files%2Findex-22.html;h=0000000000000000000000000000000000000000;hb=0bbebf27d045b1345bc042bdf24ef2e6808df251;hp=22c0b586aec248bdb8d9ae676895cc1542bf90c0;hpb=5be600c3985aa7bcb8d8b51d77d773c76e6802bb;p=jabaws.git diff --git a/website/full_javadoc/index-files/index-22.html b/website/full_javadoc/index-files/index-22.html deleted file mode 100644 index 22c0b58..0000000 --- a/website/full_javadoc/index-files/index-22.html +++ /dev/null @@ -1,236 +0,0 @@ - - - - - - -W-Index - - - - - - - - - - - - -

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- - - -A B C D E F G H I J K L M N O P R S T U V W _

-W

waitForFile(long) - -Method in class compbio.engine.FilePuller -: -
waitForJob(String) - -Method in class compbio.engine.cluster.drmaa.ClusterSession -: -
waitForJob(String, long) - -Method in class compbio.engine.cluster.drmaa.ClusterSession -: -
waitForResult(ClusterSession, String) - -Static method in class compbio.engine.cluster.drmaa.ClusterUtil -: -
waitForResult() - -Method in class compbio.engine.cluster.drmaa.JobRunner -: -
waitForResult() - -Method in class compbio.engine.local.LocalRunner -: -
waitForResult() - -Method in interface compbio.engine.SyncExecutor -: Call to this method block for as long as it is required for an executable to finish its job. -
wasAborted() - -Method in class compbio.engine.cluster.drmaa.StatisticManager -: -
WHITE_SPACE - -Static variable in class compbio.data.sequence.SequenceUtil -: A whitespace character: [\t\n\x0B\f\r] -
write(TreeSet<Score>, Writer) - -Static method in class compbio.data.sequence.Score -: Outputs the List of Score objects into the Output stream. -
write(RunConfiguration) - -Static method in class compbio.engine.client.RunConfiguration -: -
write(Object, OutputStream) - -Method in class compbio.engine.conf.RunnerConfigMarshaller -: -
writeAndValidate(Object, String, OutputStream) - -Method in class compbio.engine.conf.RunnerConfigMarshaller -: -
writeClustalAlignment(Writer, Alignment) - -Static method in class compbio.data.sequence.ClustalAlignmentUtil -: Write Clustal formatted alignment Limitations: does not record the - consensus. -
writeFasta(OutputStream, List<FastaSequence>, int) - -Static method in class compbio.data.sequence.SequenceUtil -: Writes list of FastaSequeces into the outstream formatting the sequence - so that it contains width chars on each line -
writeFasta(OutputStream, List<FastaSequence>) - -Static method in class compbio.data.sequence.SequenceUtil -: Writes FastaSequence in the file, each sequence will take one line only -
writeFastaKeepTheStream(OutputStream, List<FastaSequence>, int) - -Static method in class compbio.data.sequence.SequenceUtil -: -
writeFile(String, String, String, boolean) - -Static method in class compbio.engine.client.Util -: -
writeInput(List<FastaSequence>, ConfiguredExecutable<?>) - -Static method in class compbio.runner.Util -: -
writeMarker(String, JobStatus) - -Static method in class compbio.engine.client.Util -: -
writeOut(Writer) - -Method in class compbio.data.sequence.ScoreManager.ScoreHolder -: -
writeOut(Writer) - -Method in class compbio.data.sequence.ScoreManager -: -
writeStatFile(String, String) - -Static method in class compbio.engine.client.Util -: -
WrongParameterException - Exception in compbio.metadata: WrongParameterException is thrown wherever the RunnerConfig object - does not match the actual runnable or then attempting to set the value of - Argument to invalid value.
WrongParameterException(Option<?>) - -Constructor for exception compbio.metadata.WrongParameterException -: -
WrongParameterException(String) - -Constructor for exception compbio.metadata.WrongParameterException -: -
WrongParameterException(Throwable) - -Constructor for exception compbio.metadata.WrongParameterException -: -
WrongParameterException(String, Throwable) - -Constructor for exception compbio.metadata.WrongParameterException -: -
WrongParameterExceptionBean - Class in compbio.data.msa.jaxws: This class was generated by the JAX-WS RI.
WrongParameterExceptionBean() - -Constructor for class compbio.data.msa.jaxws.WrongParameterExceptionBean -: -
WSTester - Class in compbio.ws.client: Class for testing web services
WSTester(String, PrintWriter) - -Constructor for class compbio.ws.client.WSTester -: Construct an instance of JABAWS tester -
WSUtil - Class in compbio.ws.server
WSUtil() - -Constructor for class compbio.ws.server.WSUtil -: -