X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Findex.html;h=e93cb3c983b100ddb5d43a65056ca0d5d2ab57f3;hb=79c252c0ca4db2482cbbcd89841b409a5c413bdb;hp=35cb0290c99e97f48bdf197dfdd415d57b3a1f90;hpb=c219257fd9512af182cd65ab5bda8d3dc7ef12c6;p=jabaws.git

diff --git a/website/index.html b/website/index.html
index 35cb029..e93cb3c 100644
--- a/website/index.html
+++ b/website/index.html
@@ -32,8 +32,9 @@ page</title>
  <a href="quick_start.html">Getting Started</a> 
  <a href="man_about.html">Manual</a> 
  <a href="download.html">Download</a> 
- <a href="contacts.html">Contact Us</a>
  <a href="PublicAnnualStat" title="JABAWS server usage statistics">Usage Statistics</a>
+ <a href="ServiceStatus" title="JABAWS webservices status. Click to test all web services. Please be patient while the services are being checked">Services Status</a>
+ <a href="contacts.html">Contact Us</a>
  <a href="http://www.compbio.dundee.ac.uk" title="University of Dundee, The Barton Group" >Barton Group</a></div>
 
 <!-- panel end-->
@@ -51,9 +52,9 @@ page</title>
   <div class="brick_header"><h2>For Users</h2></div>
     <div class="brick_content">
         <strong>The Server: </strong><a href="http://www.compbio.dundee.ac.uk/jabaws/archive/jabaws-vm.zip">JABAWS Virtual Appliance:</a> (520M)
-    	<br/>
+    	or <a href="man_awscloud.html">use JABAWS on Amazon Webservices Cloud</a><br/>
     	<strong>The Client: </strong><a href="http://www.jalview.org/download.html">Jalview</a> (18M)
-		<p>To use JABA Web Services on most operating systems, just download and <a href="manual_qs_va.html#qsc">install</a> the JABAWS Virtual Appliance (VA) and point Jalview at it.</p>
+		<p>To use JABA Web Services on most operating systems, just download and <a href="manual_qs_va.html#qsc">install</a> the JABAWS Virtual Appliance (VA) or even easier - just start JABAWS machine on the cloud and point Jalview at it!</p>
      </div>
   </div>
   </td>
@@ -63,7 +64,7 @@ page</title>
 	     <div class="brick_header"><h2>For System Administrators</h2></div>
 		 <div class="brick_content">
 		   <p><strong>The Server: </strong><a href=
-"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive</a> (51M)		   </p>
+"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive</a> (55M)		   </p>
 		   <p>JABAWS requires a Servlet 2.4 compatible servlet container like Apache-Tomcat to run. Please check the quick start guide for <a href="manual_qs_war.html#qsc">installation instructions</a>.</p>
 		 </div>
 		</div></td>
@@ -73,7 +74,7 @@ page</title>
 	     <div class="brick_header"><h2>For Bioinformaticians/Developers</h2></div>
 		 <div class="brick_content">
 <strong>The Server: </strong><a href=
-"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive</a>  (51M)
+"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive</a>  (55M)
   <br/>
   <strong>The Client: </strong>
       Command Line Client <a href="http://www.compbio.dundee.ac.uk/jabaws/archive/min-jaba-client-2.0.jar">binary</a> | <a href=
@@ -98,15 +99,15 @@ Check out the <a href="manual_qs_client.html#qsc">quick start guide</a> for furt
 title="http://www.compbio.dundee.ac.uk/jabaws/ClustalWS?" rel=
 "nofollow">WSDL List</a></li>
 </ul>
-<p>The maximum number of sequences you can align with this public web service is 1000 with up to 1000 letters average length. Should you find this to be insufficient for your needs, or if you are concerned about privacy or on an unreliable network connection, then you can <a href="quick_start.html">download</a> and run the JABAWS Server on your own hardware.</p>
+<p>These web services will reject submissions containing more then one thousand sequences.  Should you find this to be insufficient for your needs, or if you are concerned about privacy or on an unreliable network connection, then you can <a href="download.html">download</a> and run the JABAWS Server on your own hardware.</p>
 
 
-<h3>Publication</h3>
+<h3>Reference</h3>
 <p><span class="hightlight"></span> Peter V. Troshin, James B. Procter and Geoffrey J. Barton - &quot;Java Bioinformatics Analysis Web Services for Multiple Sequence Alignment - JABAWS:MSA&quot; <span class="i">Bioinformatics</span> 2011; <a href="http://bioinformatics.oxfordjournals.org/content/early/2011/05/18/bioinformatics.btr304.abstract?keytype=ref&amp;ijkey=gd0DwuYBzFRhe4T">doi: 10.1093/bioinformatics/btr304</a>.</p>
 </div>
 
 <!-- content end-->
-<div id="copyright">Last update: 2 August 2011<br />
+<div id="copyright">Last update: 16 September 2011<br />
  This site is best viewed in Firefox 3.6, Google Chrome 10, Internet Explorer 8 or above </div>
 </div>