X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fman_client.html;h=d84f2a64c3edad9dfce030460ac0c66e5c71c0d8;hb=6338c0cebe13936bde3d3d2cbe6aca0c8f82f5f4;hp=473b653080b4a3d688d08e5208fb901c6a2b56d3;hpb=a284b66c119ee21683202f51e5276d5a5ee7f121;p=jabaws.git diff --git a/website/man_client.html b/website/man_client.html index 473b653..d84f2a6 100644 --- a/website/man_client.html +++ b/website/man_client.html @@ -39,7 +39,7 @@ JABAWS JABAWS Development -Download +Download Usage Statistics Services Status Contact Us @@ -51,7 +51,7 @@

JABAWS MANUAL

JABAWS Command Line Client Usage

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The command line client comes as a part of client package which you are welcome to download. The command line client can be used to align sequences using any of JABAWS supported web services. The client is OS independent and supports most of the functions which can be accessed programmatically via JABAWS API. Using this client you could align sequences using presets or custom parameters, please see examples of this below. Here is the list of options supported by the command line client.

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The command line client comes as a part of client package which you are welcome to download. The command line client can be used to align sequences using any of JABAWS supported web services. The client is OS independent and supports most of the functions which can be accessed programmatically via JABAWS API. Using this client you could align sequences using presets or custom parameters, please see examples of this below. Here is the list of options supported by the command line client.

Usage: java -jar <path_to_jar_file> -h=host_and_context -s=serviceName ACTION [OPTIONS]
-h=<host_and_context> - a full URL to the JABAWS web server including context path e.g. http://10.31.10.159:8080/ws
-s=<ServiceName> - one of [MafftWS, MuscleWS, ClustalWS, ClustalOWS, TcoffeeWS, ProbconsWS, AAConWS, JronnWS, DisemblWS, GlobPlotWS, IUPredWS]