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authorjprocter <jprocter@compbio.dundee.ac.uk>
Thu, 14 Dec 2006 17:42:54 +0000 (17:42 +0000)
committerjprocter <jprocter@compbio.dundee.ac.uk>
Thu, 14 Dec 2006 17:42:54 +0000 (17:42 +0000)
commite15b38a5b95e0aa5b11707728abb539c073fe27c
tree35dd301d5c620db891446b4cee93ec8a656e9d36tree | snapshot
parentbfd813ba38e1d432d49a311422ade5ba33203a43commit | diff
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git-svn-id: https://svn.lifesci.dundee.ac.uk/svn/repository/trunk@264 be28352e-c001-0410-b1a7-c7978e42abec
149 files changed:
src/org/vamsas/client/ClientDocument.java [new file with mode: 0644] blob
src/org/vamsas/client/ClientHandle.java [new file with mode: 0644] blob
src/org/vamsas/client/Events.java [new file with mode: 0644] blob
src/org/vamsas/client/IClient.java [new file with mode: 0644] blob
src/org/vamsas/client/IClientAppdata.java [new file with mode: 0644] blob
src/org/vamsas/client/IClientDocument.java [new file with mode: 0644] blob
src/org/vamsas/client/IClientFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/IObjectUpdate.java [new file with mode: 0644] blob
src/org/vamsas/client/IVorbaIdFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/Iapp.java [new file with mode: 0644] blob
src/org/vamsas/client/InvalidSessionUrnException.java [new file with mode: 0644] blob
src/org/vamsas/client/NoDefaultSessionException.java [new file with mode: 0644] blob
src/org/vamsas/client/SessionHandle.java [new file with mode: 0644] blob
src/org/vamsas/client/SessionUrn.java [new file with mode: 0644] blob
src/org/vamsas/client/UserHandle.java [new file with mode: 0644] blob
src/org/vamsas/client/Vobject.java [new file with mode: 0644] blob
src/org/vamsas/client/Vobjhash.java [new file with mode: 0644] blob
src/org/vamsas/client/VorbaId.java [new file with mode: 0644] blob
src/org/vamsas/client/VorbaIdFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/VorbaXmlBinder.java [new file with mode: 0644] blob
src/org/vamsas/client/picking/PickEndPoint.java [new file with mode: 0644] blob
src/org/vamsas/client/picking/PickManager.java [new file with mode: 0644] blob
src/org/vamsas/client/picking/PickServer.java [new file with mode: 0644] blob
src/org/vamsas/client/picking/TestApp.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/AppDataInputStream.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/AppDataOutputStream.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/ArchiveUrn.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/ClientDocument.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/ClientsFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/EventGeneratorThread.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/FileLock.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/FileWatcher.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/IdFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/ListFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/Lock.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/LockFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/LockTimeoutException.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/LockedFileOutputStream.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/NativeLock.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SessionFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SessionFlagFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SessionUrn.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SessionsFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SimpleClient.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SimpleClientAppdata.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SimpleClientFactory.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SimpleDocBinding.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/SimpleDocument.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/VamsasArchive.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/VamsasArchiveReader.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/VamsasFile.java [new file with mode: 0644] blob
src/org/vamsas/client/simpleclient/VamsasSession.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/.castor.cdr [new file with mode: 0644] blob
src/org/vamsas/objects/core/Alignment.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentAnnotation.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentAnnotationDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentSequence.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentSequenceAnnotation.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentSequenceAnnotationDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AlignmentSequenceDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AnnotationElement.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AnnotationElementDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AppData.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AppDataDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/ApplicationData.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/ApplicationDataDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Attachment.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/AttachmentDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Common.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/CommonDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DataSet.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DataSetAnnotations.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DataSetAnnotationsDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DataSetDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DbRef.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/DbRefDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Entry.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/EntryDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Glyph.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/GlyphDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Input.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/InputDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Instance.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/InstanceDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Link.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/LinkDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/LockFile.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/LockFileDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Map.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/MapDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/MapList.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/MapListDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Mapping.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/MappingDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Newick.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/NewickDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Param.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/ParamDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Pos.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/PosDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Property.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/PropertyDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Provenance.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/ProvenanceDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/RangeAnnotation.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/RangeAnnotationDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/RangeType.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/RangeTypeDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Score.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/ScoreDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Seg.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/SegDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Sequence.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/SequenceDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/SequenceType.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/SequenceTypeDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/Tree.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/TreeDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/User.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/UserDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/VAMSAS.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/VAMSASDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/VamsasDocument.java [new file with mode: 0644] blob
src/org/vamsas/objects/core/VamsasDocumentDescriptor.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/AppDataReference.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/DocumentStuff.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/Format.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/GlyphDictionary.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/ProvenanceStuff.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/Seq.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/SeqAln.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/SeqSet.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/SymbolDictionary.java [new file with mode: 0644] blob
src/org/vamsas/objects/utils/document/VersionEntries.java [new file with mode: 0644] blob
src/org/vamsas/test/ExampleApplication.java [new file with mode: 0644] blob
src/org/vamsas/test/objects/Core.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveClient.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveReader.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveReports.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveStreamReader.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveWatcher.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ArchiveWriter.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ClientDoc.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/ClientsFileTest.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/CommandProcessor.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/VamsasArchive.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/simpleapp/VamsasClient.java [new file with mode: 0644] blob
src/org/vamsas/test/simpleclient/simpleapp/VamsasDatastore.java [new file with mode: 0644] blob