Features added

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index 088d427..cb977d0 100755 (executable)
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -71,6 +71,12 @@ public class AlignViewport
     boolean scaleAboveWrapped = false;\r
     boolean scaleLeftWrapped = true;\r
     boolean scaleRightWrapped = true;\r
+    boolean hasHiddenColumns = false;\r
+\r
+    // The following vector holds the features which are\r
+    // currently visible, in the correct order or rendering\r
+    Hashtable featuresDisplayed = null;\r
+\r
 \r
     /** DOCUMENT ME!! */\r
     public Vector vconsensus;\r
@@ -178,11 +184,16 @@ public class AlignViewport
      *\r
      * @param b DOCUMENT ME!\r
      */\r
-    public void showSequenceFeatures(boolean b)\r
+    public void setShowSequenceFeatures(boolean b)\r
     {\r
         showSequenceFeatures = b;\r
     }\r
 \r
+    public boolean getShowSequenceFeatures()\r
+    {\r
+      return showSequenceFeatures;\r
+    }\r
+\r
     /**\r
      * DOCUMENT ME!\r
      */\r