Fix PaSiMap not having the eigenvalues saved

diff --git a/src/jalview/math/Matrix.java b/src/jalview/math/Matrix.java
index 85d0db3..7ae4b94 100755 (executable)
--- a/src/jalview/math/Matrix.java
+++ b/src/jalview/math/Matrix.java
@@ -1432,6 +1432,12 @@ public class Matrix implements MatrixI
        result[i][k--] = this.getValue(i,j);
       }
     }
-    return new Matrix(result);
+    MatrixI resultMatrix = new Matrix(result);
+    if (d != null)
+      resultMatrix.setD(d);
+    if (e != null)
+      resultMatrix.setE(e);
+
+    return resultMatrix;
   }
 }