From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Tue, 14 Apr 2020 08:26:14 +0000 (+0100)
Subject: JAL-3583 remove debug logging, Javadoc added
X-Git-Tag: Develop-2_11_2_0-d20201215~24^2~68^2~7
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=2b21aa74fdc06b43a1c6d80653e7bd51574b78bf;p=jalview.git

JAL-3583 remove debug logging, Javadoc added
---

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index f433aec..2ad5bea 100644
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -1145,9 +1145,8 @@ public class SeqPanel extends JPanel
 
     String tooltip = AnnotationPanel.buildToolTip(anns[rowIndex], column,
             anns);
-    if (true || !tooltip.equals(lastTooltip))
+    if (!tooltip.equals(lastTooltip))
     {
-      System.out.println("wrapped tooltip set");
       lastTooltip = tooltip;
       lastFormattedTooltip = tooltip == null ? null
               : JvSwingUtils.wrapTooltip(true, tooltip);
diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java
index 4933cd6..9d7fcfc 100644
--- a/src/jalview/io/SequenceAnnotationReport.java
+++ b/src/jalview/io/SequenceAnnotationReport.java
@@ -20,6 +20,12 @@
  */
 package jalview.io;
 
+import java.util.Collection;
+import java.util.Comparator;
+import java.util.LinkedHashMap;
+import java.util.List;
+import java.util.Map;
+
 import jalview.api.FeatureColourI;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.DBRefSource;
@@ -32,13 +38,6 @@ import jalview.util.StringUtils;
 import jalview.util.UrlLink;
 import jalview.viewmodel.seqfeatures.FeatureRendererModel;
 
-import java.util.Arrays;
-import java.util.Collection;
-import java.util.Comparator;
-import java.util.LinkedHashMap;
-import java.util.List;
-import java.util.Map;
-
 /**
  * generate HTML reports for a sequence
  * 
@@ -299,17 +298,26 @@ public class SequenceAnnotationReport
     appendFeature(sb, rpos, fr, feature, mf, 0);
   }
 
+  /**
+   * Appends {@code sb} to {@code sb0}, and returns false, unless
+   * {@code maxlength} is not zero and appending would make the total length
+   * greater than {@code maxlength}, in which case the text is not appended, and
+   * the method returns true.
+   * 
+   * @param sb0
+   * @param sb
+   * @param maxlength
+   * @return
+   */
   private static boolean appendTextMaxLengthReached(StringBuilder sb0,
           StringBuilder sb, int maxlength)
   {
-    boolean ret = false;
     if (maxlength == 0 || sb0.length() + sb.length() < maxlength)
     {
       sb0.append(sb);
       return false;
-    } else {
-      return true;
     }
+    return true;
   }
 
   /**