From: jprocter <Jim Procter>
Date: Thu, 4 Dec 2008 10:20:59 +0000 (+0000)
Subject: clarity of tree menu calculation widget name
X-Git-Tag: Release_2_5~397
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=60add128f303f7628b3ead9d841913a8b22ce5ca;p=jalview.git

clarity of tree menu calculation widget name
---

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 408a1ed..fdda4ca 100755
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -186,7 +186,7 @@ public class GAlignFrame extends JInternalFrame
 
   protected JMenu sort = new JMenu();
 
-  JMenu calculate = new JMenu();
+  protected JMenu calculateTree = new JMenu();
 
   JMenu jMenu2 = new JMenu();
 
@@ -1175,7 +1175,7 @@ public class GAlignFrame extends JInternalFrame
     });
     sortByAnnotScore.setVisible(false);
 
-    calculate.setText("Calculate Tree");
+    calculateTree.setText("Calculate Tree");
 
     jMenu2.setText("Export Image");
     padGapsMenuitem.setText("Pad Gaps");
@@ -1556,7 +1556,7 @@ public class GAlignFrame extends JInternalFrame
     colourMenu.add(modifyPID);
     colourMenu.add(annotationColour);
     calculateMenu.add(sort);
-    calculateMenu.add(calculate);
+    calculateMenu.add(calculateTree);
     calculateMenu.addSeparator();
     calculateMenu.add(pairwiseAlignmentMenuItem);
     calculateMenu.add(PCAMenuItem);
@@ -1574,10 +1574,10 @@ public class GAlignFrame extends JInternalFrame
     sort.add(sortGroupMenuItem);
     sort.add(sortPairwiseMenuItem);
     sort.add(sortByTreeMenu);
-    calculate.add(averageDistanceTreeMenuItem);
-    calculate.add(neighbourTreeMenuItem);
-    calculate.add(avDistanceTreeBlosumMenuItem);
-    calculate.add(njTreeBlosumMenuItem);
+    calculateTree.add(averageDistanceTreeMenuItem);
+    calculateTree.add(neighbourTreeMenuItem);
+    calculateTree.add(avDistanceTreeBlosumMenuItem);
+    calculateTree.add(njTreeBlosumMenuItem);
     jMenu2.add(htmlMenuItem);
     jMenu2.add(epsFile);
     jMenu2.add(createPNG);