From: jprocter <Jim Procter>
Date: Mon, 10 Sep 2007 14:31:30 +0000 (+0000)
Subject: ensure dbrefs are added to dataset sequence.
X-Git-Tag: Release_2_4~276
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=89077cf6f65c82f9004592a0b4d3bde391163286;p=jalview.git

ensure dbrefs are added to dataset sequence.
---

diff --git a/src/jalview/ws/dbsources/Uniprot.java b/src/jalview/ws/dbsources/Uniprot.java
index 789688c..aa324dc 100644
--- a/src/jalview/ws/dbsources/Uniprot.java
+++ b/src/jalview/ws/dbsources/Uniprot.java
@@ -175,7 +175,10 @@ public class Uniprot extends DbSourceProxyImpl implements DbSourceProxy
         onlyPdbEntries.addElement(pdb);
       }
       SequenceI sq = al.getSequenceAt(i);
-      sq = (sq.getDatasetSequence()==null) ? sq : sq.getDatasetSequence();
+      while (sq.getDatasetSequence()!=null)
+      {
+        sq = sq.getDatasetSequence();
+      }
 
       Enumeration en2 = entry.getAccession().elements();
       while (en2.hasMoreElements())