From: James Procter <j.procter@dundee.ac.uk>
Date: Mon, 20 Mar 2023 15:28:52 +0000 (+0000)
Subject: JAL-4134 fix off-by-one in selection
X-Git-Tag: Release_2_11_3_0~15^2^2~7
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=b4e338d9552909ddf9079e61d00f5a7b18269340;hp=6003c80f7fe8bd5d1b8287e9e7126514b0d7e292;p=jalview.git

JAL-4134 fix off-by-one in selection
---

diff --git a/src/jalview/gui/TreeCanvas.java b/src/jalview/gui/TreeCanvas.java
index cae2f31..7af8940 100755
--- a/src/jalview/gui/TreeCanvas.java
+++ b/src/jalview/gui/TreeCanvas.java
@@ -1079,15 +1079,15 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
       ColumnSelection cs = av.getColumnSelection();
       HiddenColumns hc = av.getAlignment().getHiddenColumns();
       {
-        int offp = (rseq!=null) ? rseq.findIndex(rseq.getStart()-1+colm) : colm;
+        int offp = (rseq!=null) ? rseq.findIndex(rseq.getStart()+colm) : colm;
         
-        if (!av.hasHiddenColumns() || hc.isVisible(offp))
+        if (!av.hasHiddenColumns() || hc.isVisible(offp-1))
         { 
-          if (cs.contains(offp))
+          if (cs.contains(offp-1))
           {
-            cs.removeElement(offp);
+            cs.removeElement(offp-1);
           } else {
-            cs.addElement(offp);
+            cs.addElement(offp-1);
           }
         }
       }