From 3d0867bf4ce1e80d1b147a29b3cbc982ee84167c Mon Sep 17 00:00:00 2001 From: pvtroshin Date: Tue, 20 Jul 2010 12:51:03 +0000 Subject: [PATCH] Fix copyright header git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2612 e3abac25-378b-4346-85de-24260fe3988d --- .../compbio/pipeline/_jpred/BlastBlastComparator.java | 2 +- .../compbio/pipeline/_jpred/BlastHmmerComparator.java | 2 +- runner/compbio/pipeline/_jpred/BlastParser.java | 2 +- runner/compbio/pipeline/_jpred/Hit.java | 16 +++++++++++++++- .../compbio/pipeline/_jpred/JackHmmerHitParser.java | 17 +++++++++++++++++ runner/compbio/pipeline/_jpred/Jpred4.java | 2 +- runner/compbio/pipeline/_jpred/PScore.java | 2 +- runner/compbio/pipeline/_jpred/Pairwise.java | 2 +- runner/compbio/runner/disorder/RonnWrapper.java | 2 +- 9 files changed, 39 insertions(+), 8 deletions(-) diff --git a/runner/compbio/pipeline/_jpred/BlastBlastComparator.java b/runner/compbio/pipeline/_jpred/BlastBlastComparator.java index a85c17b..655dceb 100644 --- a/runner/compbio/pipeline/_jpred/BlastBlastComparator.java +++ b/runner/compbio/pipeline/_jpred/BlastBlastComparator.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java b/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java index 21dec65..fbd04d9 100644 --- a/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java +++ b/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/BlastParser.java b/runner/compbio/pipeline/_jpred/BlastParser.java index 7039588..7ed0d50 100644 --- a/runner/compbio/pipeline/_jpred/BlastParser.java +++ b/runner/compbio/pipeline/_jpred/BlastParser.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/Hit.java b/runner/compbio/pipeline/_jpred/Hit.java index c8351d9..6c60c97 100644 --- a/runner/compbio/pipeline/_jpred/Hit.java +++ b/runner/compbio/pipeline/_jpred/Hit.java @@ -1,5 +1,19 @@ -/** +/* Copyright (c) 2009 Peter Troshin + * + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * + * This library is free software; you can redistribute it and/or modify it under the terms of the + * Apache License version 2 as published by the Apache Software Foundation + * + * This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without + * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache + * License for more details. + * + * A copy of the license is in apache_license.txt. It is also available here: + * @see: http://www.apache.org/licenses/LICENSE-2.0.txt + * + * Any republication or derived work distributed in source code form + * must include this copyright and license notice. */ package compbio.pipeline._jpred; diff --git a/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java b/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java index fb91920..54bfa09 100644 --- a/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java +++ b/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java @@ -1,3 +1,20 @@ +/* Copyright (c) 2009 Peter Troshin + * + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * + * This library is free software; you can redistribute it and/or modify it under the terms of the + * Apache License version 2 as published by the Apache Software Foundation + * + * This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without + * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache + * License for more details. + * + * A copy of the license is in apache_license.txt. It is also available here: + * @see: http://www.apache.org/licenses/LICENSE-2.0.txt + * + * Any republication or derived work distributed in source code form + * must include this copyright and license notice. + */ package compbio.pipeline._jpred; import java.io.BufferedReader; diff --git a/runner/compbio/pipeline/_jpred/Jpred4.java b/runner/compbio/pipeline/_jpred/Jpred4.java index d6823e0..e14fddf 100644 --- a/runner/compbio/pipeline/_jpred/Jpred4.java +++ b/runner/compbio/pipeline/_jpred/Jpred4.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/PScore.java b/runner/compbio/pipeline/_jpred/PScore.java index 3b14722..1bd6200 100644 --- a/runner/compbio/pipeline/_jpred/PScore.java +++ b/runner/compbio/pipeline/_jpred/PScore.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/Pairwise.java b/runner/compbio/pipeline/_jpred/Pairwise.java index c3d314c..13c765d 100644 --- a/runner/compbio/pipeline/_jpred/Pairwise.java +++ b/runner/compbio/pipeline/_jpred/Pairwise.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/disorder/RonnWrapper.java b/runner/compbio/runner/disorder/RonnWrapper.java index a45601a..0bd621e 100644 --- a/runner/compbio/runner/disorder/RonnWrapper.java +++ b/runner/compbio/runner/disorder/RonnWrapper.java @@ -1,6 +1,6 @@ /* Copyright (c) 2009 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation -- 1.7.10.2