From 04b6d995eb9395cb4107b28119fff413d8bacafd Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 28 Sep 2005 16:53:46 +0000
Subject: [PATCH] Applet frame name

---
 src/jalview/appletgui/AlignFrame.java          |   34 +++++++++++++++++++++---
 src/jalview/appletgui/CutAndPasteTransfer.java |    6 ++---
 src/jalview/appletgui/PairwiseAlignPanel.java  |    7 +++--
 src/jalview/bin/JalviewLite.java               |   25 ++---------------
 4 files changed, 37 insertions(+), 35 deletions(-)

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index bda314d..0f275de 100755
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -35,12 +35,12 @@ public class AlignFrame
 {
   final AlignmentPanel alignPanel;
   final AlignViewport viewport;
-  public static int NEW_WINDOW_WIDTH = 700;
-  public static int NEW_WINDOW_HEIGHT = 500;
+  int NEW_WINDOW_WIDTH = 700;
+  int NEW_WINDOW_HEIGHT = 500;
   jalview.bin.JalviewLite applet;
 
 
-  public AlignFrame(AlignmentI al, jalview.bin.JalviewLite applet)
+  public AlignFrame(AlignmentI al, jalview.bin.JalviewLite applet, String title)
   {
     this.applet = applet;
     viewport = new AlignViewport(al, applet);
@@ -93,6 +93,25 @@ public class AlignFrame
           wrapMenuItem_actionPerformed(null);
         }
       }
+
+      try
+      {
+        param = applet.getParameter("windowWidth");
+        if (param != null)
+        {
+          int width = Integer.parseInt(param);
+          NEW_WINDOW_WIDTH = width;
+        }
+        param = applet.getParameter("windowHeight");
+        if (param != null)
+        {
+          int height = Integer.parseInt(param);
+          NEW_WINDOW_HEIGHT = height;
+        }
+      }
+      catch (Exception ex)
+      {}
+
     }
 
     this.addWindowListener(new WindowAdapter()
@@ -113,6 +132,12 @@ public class AlignFrame
        }
      }
    });
+
+   jalview.bin.JalviewLite.addFrame(this, title,
+                                    NEW_WINDOW_WIDTH,
+                                    NEW_WINDOW_HEIGHT);
+
+
   }
 
   public void inputText_actionPerformed(ActionEvent e)
@@ -412,7 +437,6 @@ public class AlignFrame
           newSeqs[i] = (SequenceI) seqs.elementAt(i);
         }
 
-        AlignFrame af = new AlignFrame(new Alignment(newSeqs), applet);
         String newtitle = new String("Copied sequences");
         if (getTitle().startsWith("Copied sequences"))
         {
@@ -422,6 +446,8 @@ public class AlignFrame
         {
           newtitle = newtitle.concat("- from " + getTitle());
         }
+        AlignFrame af = new AlignFrame(new Alignment(newSeqs), applet, newtitle);
+
         jalview.bin.JalviewLite.addFrame(af, newtitle, NEW_WINDOW_WIDTH,
                                          NEW_WINDOW_HEIGHT);
       }
diff --git a/src/jalview/appletgui/CutAndPasteTransfer.java b/src/jalview/appletgui/CutAndPasteTransfer.java
index 90bd343..4c0d3de 100755
--- a/src/jalview/appletgui/CutAndPasteTransfer.java
+++ b/src/jalview/appletgui/CutAndPasteTransfer.java
@@ -78,10 +78,8 @@ public class CutAndPasteTransfer
 
     if (sequences != null)
     {
-      AlignFrame af = new AlignFrame(new Alignment(sequences), applet);
-      jalview.bin.JalviewLite.addFrame(af, "Cut & Paste input - " + format,
-                                       AlignFrame.NEW_WINDOW_WIDTH,
-                                       AlignFrame.NEW_WINDOW_HEIGHT);
+      AlignFrame af = new AlignFrame(new Alignment(sequences), applet,
+                                     "Cut & Paste input - " + format);
       af.statusBar.setText("Successfully pasted alignment file");
     }
 
diff --git a/src/jalview/appletgui/PairwiseAlignPanel.java b/src/jalview/appletgui/PairwiseAlignPanel.java
index 0ff2708..c9285dd 100755
--- a/src/jalview/appletgui/PairwiseAlignPanel.java
+++ b/src/jalview/appletgui/PairwiseAlignPanel.java
@@ -88,10 +88,9 @@ public class PairwiseAlignPanel
       seq[i] = (Sequence) sequences.elementAt(i);
     }
 
-    AlignFrame af = new AlignFrame(new Alignment(seq), ap.alignFrame.applet);
-    jalview.bin.JalviewLite.addFrame(af, "Pairwise Aligned Sequences",
-                                     AlignFrame.NEW_WINDOW_WIDTH,
-                                     AlignFrame.NEW_WINDOW_HEIGHT);
+    AlignFrame af = new AlignFrame(new Alignment(seq),
+                                   ap.alignFrame.applet,
+                                   "Pairwise Aligned Sequences");
 
   }
 
diff --git a/src/jalview/bin/JalviewLite.java b/src/jalview/bin/JalviewLite.java
index 9b73944..1e94a0d 100755
--- a/src/jalview/bin/JalviewLite.java
+++ b/src/jalview/bin/JalviewLite.java
@@ -73,23 +73,6 @@ public class JalviewLite extends Applet
             }
         }
 
-        AlignFrame.NEW_WINDOW_WIDTH = 700;
-        AlignFrame.NEW_WINDOW_HEIGHT = 500;
-        try{
-          param = applet.getParameter("windowWidth");
-          if (param != null)
-          {
-            int width = Integer.parseInt(param);
-            AlignFrame.NEW_WINDOW_WIDTH = width;
-          }
-          param = applet.getParameter("windowHeight");
-          if (param != null)
-          {
-            int height = Integer.parseInt(param);
-            AlignFrame.NEW_WINDOW_HEIGHT = height;
-          }
-        }catch(Exception ex){}
-
         this.setBackground(new Color(r, g, b));
 
         file = getParameter("file");
@@ -129,9 +112,7 @@ public class JalviewLite extends Applet
 
       if ( (sequences != null) && (sequences.length > 0))
       {
-        AlignFrame af = new AlignFrame(new Alignment(sequences), null);
-        addFrame(af, args[0], AlignFrame.NEW_WINDOW_WIDTH,
-                 AlignFrame.NEW_WINDOW_HEIGHT);
+        AlignFrame af = new AlignFrame(new Alignment(sequences), null, args[0]);
         af.statusBar.setText("Successfully loaded file " + args[0]);
       }
     }
@@ -251,9 +232,7 @@ public class JalviewLite extends Applet
             if ((sequences != null) && (sequences.length > 0))
             {
                 AlignFrame af = new AlignFrame(new Alignment(sequences),
-                        jlapplet);
-                addFrame(af, file, AlignFrame.NEW_WINDOW_WIDTH,
-                    AlignFrame.NEW_WINDOW_HEIGHT);
+                        jlapplet, file);
                 af.statusBar.setText("Successfully loaded file " + file);
             }
             else
-- 
1.7.10.2