From 78d2505796862e461409abd797ae322eddda9948 Mon Sep 17 00:00:00 2001
From: jprocter <Jim Procter>
Date: Thu, 17 Aug 2006 13:31:23 +0000
Subject: [PATCH] javadoc

---
 src/jalview/datamodel/AlignmentOrder.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/datamodel/AlignmentOrder.java b/src/jalview/datamodel/AlignmentOrder.java
index 9a2ed8c..7127b52 100755
--- a/src/jalview/datamodel/AlignmentOrder.java
+++ b/src/jalview/datamodel/AlignmentOrder.java
@@ -171,7 +171,7 @@ public class AlignmentOrder
      * replaces oldref with newref in the alignment order.
      * @param oldref
      * @param newref
-     * @return
+     * @return true if oldref was contained in order and replaced with newref
      */
     public boolean updateSequence(SequenceI oldref, SequenceI newref) {
       int found=Order.indexOf(oldref);
-- 
1.7.10.2