From 093795d37cb42b73f7620e1d3a6d70b4d16fa692 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 22 Sep 2005 15:53:18 +0000
Subject: [PATCH] Create Instance of FormatAdapter

---
 src/jalview/ws/JPredClient.java |    3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/src/jalview/ws/JPredClient.java b/src/jalview/ws/JPredClient.java
index 45e331a..8f94e97 100755
--- a/src/jalview/ws/JPredClient.java
+++ b/src/jalview/ws/JPredClient.java
@@ -26,6 +26,7 @@ import ext.vamsas.*;
 import jalview.analysis.*;
 import jalview.datamodel.*;
 import jalview.gui.*;
+import jalview.io.FormatAdapter;
 
 public class JPredClient
     extends WSClient
@@ -400,7 +401,7 @@ public class JPredClient
 
           if (jalview.io.FormatAdapter.formats.contains(format))
           {
-            al = new Alignment(jalview.io.FormatAdapter.readFile(
+            al = new Alignment(new FormatAdapter().readFile(
                 result.getAligfile(), "Paste", format));
             for (int i=0, j=al.getHeight(); i<j; i++) {
               SequenceI sq = al.getSequenceAt(i);
-- 
1.7.10.2