From 447cc635623ba2c4c6b1ac9dbb32d660d3172f96 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 21 Dec 2006 13:49:44 +0000
Subject: [PATCH] getSequenceAsString

---
 src/jalview/datamodel/SeqCigar.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/datamodel/SeqCigar.java b/src/jalview/datamodel/SeqCigar.java
index 760123b..7363e9e 100644
--- a/src/jalview/datamodel/SeqCigar.java
+++ b/src/jalview/datamodel/SeqCigar.java
@@ -578,7 +578,7 @@ public class SeqCigar
         System.out.println("" + al.getSequenceAt(i).getName() + "\t" +
                            al.getSequenceAt(i).getStart() + "\t" +
                            al.getSequenceAt(i).getEnd() + "\t" +
-                           al.getSequenceAt(i).getSequence());
+                           al.getSequenceAt(i).getSequenceAsString());
       }
     }
     {
-- 
1.7.10.2