From 89077cf6f65c82f9004592a0b4d3bde391163286 Mon Sep 17 00:00:00 2001
From: jprocter <Jim Procter>
Date: Mon, 10 Sep 2007 14:31:30 +0000
Subject: [PATCH] ensure dbrefs are added to dataset sequence.

---
 src/jalview/ws/dbsources/Uniprot.java |    5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/src/jalview/ws/dbsources/Uniprot.java b/src/jalview/ws/dbsources/Uniprot.java
index 789688c..aa324dc 100644
--- a/src/jalview/ws/dbsources/Uniprot.java
+++ b/src/jalview/ws/dbsources/Uniprot.java
@@ -175,7 +175,10 @@ public class Uniprot extends DbSourceProxyImpl implements DbSourceProxy
         onlyPdbEntries.addElement(pdb);
       }
       SequenceI sq = al.getSequenceAt(i);
-      sq = (sq.getDatasetSequence()==null) ? sq : sq.getDatasetSequence();
+      while (sq.getDatasetSequence()!=null)
+      {
+        sq = sq.getDatasetSequence();
+      }
 
       Enumeration en2 = entry.getAccession().elements();
       while (en2.hasMoreElements())
-- 
1.7.10.2