From 9a00a8e6f4aea99953119851187421d23e1eecd2 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Thu, 9 Jul 2015 17:21:22 +0100 Subject: [PATCH] JAL-1869 make per-sequence RNA helix colours each time Colour By Annotation is opened --- src/jalview/schemes/AnnotationColourGradient.java | 1 + src/jalview/schemes/ColourSchemeProperty.java | 8 ++++++++ 2 files changed, 9 insertions(+) diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java index 121d6ca..60a20fa 100755 --- a/src/jalview/schemes/AnnotationColourGradient.java +++ b/src/jalview/schemes/AnnotationColourGradient.java @@ -193,6 +193,7 @@ public class AnnotationColourGradient extends FollowerColourScheme } if (rna) { + ColourSchemeProperty.resetRnaHelicesShading(); ColourSchemeProperty.initRnaHelicesShading(1 + (int) aamax); } } diff --git a/src/jalview/schemes/ColourSchemeProperty.java b/src/jalview/schemes/ColourSchemeProperty.java index 5715ada..0d9c39d 100755 --- a/src/jalview/schemes/ColourSchemeProperty.java +++ b/src/jalview/schemes/ColourSchemeProperty.java @@ -626,4 +626,12 @@ public class ColourSchemeProperty } } + /** + * delete the existing cached RNA helces colours + */ + public static void resetRnaHelicesShading() + { + rnaHelices = null; + } + } -- 1.7.10.2