From cc0434f5f9127839cd75fb05f03d4b0e14ef37f1 Mon Sep 17 00:00:00 2001
From: jprocter <Jim Procter>
Date: Mon, 24 Jul 2006 08:43:12 +0000
Subject: [PATCH] partly finished pods.

---
 utils/gff2annot.pl |    7 +++++--
 1 file changed, 5 insertions(+), 2 deletions(-)

diff --git a/utils/gff2annot.pl b/utils/gff2annot.pl
index 0ff1d36..af4dfc5 100755
--- a/utils/gff2annot.pl
+++ b/utils/gff2annot.pl
@@ -49,7 +49,10 @@ gff2annot.pl
 
 =head2 SYNOPSIS
 
-gff2annot.pl [one or more files containing gff annotation]
+
+  gff2annot.pl [one or more files containing gff annotation]
+
+Generates a nominally usable Jalview Annotation file on B<STDOUT> from arbitrary GFF annotation lines.
 
 =head2 DESCRIPTION
 
@@ -74,7 +77,7 @@ Passing some GFF annotation through STDIN:
   Seq2 blasty significant_hsp 1 5 0.9 + 1 link http://mylink/
   Seq2 blastz significant_hsp 1 5 0.9
   Seq3 blastx significant_hsp 50 70
-  <Control^D>
+  <Control^D/Z>
 
 Produces
 
-- 
1.7.10.2