jalview.git
2022-10-20 Jim ProcterJAL-2349 (still buggy) interactive selection - time...
2022-10-20 Jim ProcterJAL-2349 tooltip reports value from contact range
2022-10-20 Jim ProcterJAL-2349 adjusted range calculation to be inclusive...
2022-10-20 Jim ProcterJAL-2349 debugged click/drag and added yellow rubber...
2022-10-20 Jim ProcterJAL-2349 JAL-3855 - interactive point-wise row/column...
2022-10-20 Jim ProcterJAL-3855 RGB colours from the alphafold paE scale.
2022-10-19 Jim ProcterJAL-2349 JAL-4033 refactored contact matrix geom calc...
2022-10-17 Jim ProcterJAL-2349 JAL-3855 column selection highlighting
2022-10-17 Jim ProcterJAL-3855 bump AF version to 3 - keep contact renderer...
2022-10-17 Jim ProcterJAL-1551 formatting
2022-10-17 Jim ProcterJAL-2349 JAL-3855 tests that probably should be part...
2022-10-17 Jim ProcterJAL-3855 report download errors as errors!
2022-10-17 Jim ProcterJAL-2349 JAL-3855 Integrate pAE retrieval in StructureF...
2022-10-15 Jim ProcterJAL-2349 reusable contact map holder for SequenceI...
2022-10-15 Jim ProcterJAL-3855 2349 TODO
2022-10-15 Jim ProcterJAL-3855 import pAE when StructureSelectionManager...
2022-10-15 Jim ProcterJAL-3855 pAE v2 import
2022-10-14 Jim ProcterJAL-3855 refactor the pAE retrieval code so it can...
2022-10-14 Jim ProcterMerge branch 'features/JAL-3895_alphafoldcolours' into...
2022-10-14 Jim ProcterMerge branch 'develop' into features/JAL-3895_alphafold... features/JAL-3895_alphafoldcolours
2022-10-11 Jim ProcterJAL-4065 final fix for 2.11.2.5 - 5pm BST release
2022-10-11 Jim ProcterJAL-4065 revised to avoid a visit from the apostrophe...
2022-10-11 Jim ProcterJAL-4073 update tests
2022-10-11 Jim ProcterMerge branch 'develop' of https://source.jalview.org...
2022-10-11 Jim ProcterJAL-4073 fix PEBCAK failure
2022-10-11 Ben SoaresJAL-4014 Changed gecos display names to match labels...
2022-10-11 Jim ProcterJAL-4065 revised whatsNew to make sense !
2022-10-11 Jim ProcterJAL-4065 release 2.11.2.5 date is 11th Oct
2022-10-07 Jim ProcterFix for JAL-4075 - don’t write a label in secondary...
2022-10-07 Jim ProcterJAL-4065 update citations for Pfam and Rfam and added...
2022-10-07 Jim ProcterJAL-4065 2.11.2.5 release version bump
2022-10-07 Jim ProcterJAL-4065 release notes and updated release date for...
2022-10-06 Jim Procterstable url for PFAM retrieval via interpro api :) JAL...
2022-10-06 Jim ProcterJAL-1551 formatting
2022-10-06 Jim ProcterJAL-3895 alphafold colours via pluggable annotation...
2022-10-06 Jim ProcterJAL-1551 formatting
2022-10-06 Jim ProcterJAL-4065 release notes for JAL-4073 JAL-4074
2022-10-06 Jim ProcterJAL-4073 Pfam retrieval now works via a template includ...
2022-10-06 Jim ProcterPatch for JAL-4074 - any content ending in ‘gzip’ recog...
2022-09-15 Jim ProcterJAL-4065 release notes for JAL-4014 and JAL-4063 in...
2022-09-15 Jim ProcterJAL-4065 - new release notes featuring JAL-3612 fix
2022-09-14 Jim ProcterMerge branch 'bug/JAL-3612_overviewFeatureOrdering...
2022-08-23 Ben SoaresJAL-4014 JAL-4063 Added gecos colourScheme names (INFO...
2022-08-08 Jim ProcterJAL-4046 release on 9th August 2022
2022-08-08 Jim ProcterJAL-4046 JAL-3993 imports reformatting
2022-08-08 Jim ProcterJAL-4046 JAL-3993 patch for 2.11.2.4 release
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-3991
2022-08-08 Jim ProcterMerge branch 'task/JAL-3991_check_actual_JAVA_VERSION_a...
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-4014 - gecos colourschemes
2022-08-08 Jim ProcterMerge branch 'improvement/JAL-4014_gecos_colour_schemes...
2022-08-08 Jim ProcterJAL-4056 documented in release notes for JAL-4043
2022-08-08 Jim ProcterMerge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin...
2022-08-08 Jim ProcterJAL-4043 what’s new, updated help images and release...
2022-08-08 Jim ProcterJAL-4034 show the loading spinner when switching betwee...
2022-08-08 Jim ProcterMerge branch 'features/JAL-4034_improve_3dbeacons_butto...
2022-08-01 Ben SoaresJAL-4056 fixed tl;dr section of doc/building.md
2022-07-26 Ben SoaresJAL-4036 Fixed the virus_host_id query field
2022-07-26 Ben SoaresJAL-4036 Added text to help about different number...
2022-07-25 Ben SoaresJAL-4036 updated help about new UniProt API
2022-07-25 Ben SoaresJAL-4036 moved a comment block
2022-07-25 Ben SoaresJAL-4034 button looks better also on other OSes with...
2022-07-24 Ben SoaresJAL-4034 add round corners to 3DB confirmation button...
2022-07-22 Ben SoaresJAL-4036 Changes made from code review CR-JAL-265
2022-07-22 Ben SoaresJAL-4036 Add getDbName to the GFTSPanelI and add an...
2022-07-22 Ben SoaresJAL-4036 removing the query field code from the dropdow...
2022-07-21 Ben SoaresJAL-4036 Don't autosearch changing index when autosearc...
2022-07-21 Ben SoaresJAL-4036 add search fieldname to dropdown list
2022-07-21 Ben SoaresJAL-4036 removed often duplicated pluralisation in...
2022-07-21 Ben SoaresJAL-4036 New configuration, target and pagination proce...
2022-07-20 Jim ProcterJAL-4046 started release notes for 2.11.2.4 patch release
2022-07-20 Jim ProcterJAL-4045 - don't apply distribution dependent scale...
2022-07-15 Ben SoaresJAL-4034 Use the new non-modal JDialog for 3DBeacons...
2022-07-15 Ben SoaresJAL-4034 Allow request for non-modal JDialog, which...
2022-07-12 Ben SoaresJAL-4034 change to jalview property name
2022-07-12 Ben SoaresJAL-4034 showConfirmDialog works for both desktop and...
2022-07-11 Ben SoaresJAL-4034 Non-blocking 3D Beacons query after warning...
2022-07-11 Ben SoaresJAL-4034 allow a jalview_property to set the threshold...
2022-07-05 Jim ProcterJAL-4012 release date bump and JAL-4004 tweak to includ...
2022-07-04 Jim ProcterJAL-4034 fix #3 change uniprot ref fetch dialog to...
2022-07-04 Jim ProcterJAL-4034 Fix #2 show an icon and a button to press...
2022-07-04 Jim ProcterJAL-4034 fix 1 - reword button
2022-07-04 Jim ProcterJAL-4012 updated release date and whats new for 2.11.2.3
2022-07-01 Jim ProcterJAL-4012 tweak release notes wording for legacy.uniprot
2022-07-01 Jim ProcterMerge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin...
2022-07-01 Jim ProcterJAL-4036 JAL-4012 note about Uniprot FTS workaround...
2022-06-30 Jim ProcterJAL-4036 use the legacy endpoint (and report the FTS...
2022-06-28 Ben SoaresMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
2022-06-28 Ben SoaresJAL-1988 Don't put Quit in the File menu if there's...
2022-06-24 Jim ProcterJAL-2349 TODO for tests
2022-06-24 Jim ProcterJAL-2349 JAL-3855 formatting
2022-06-24 Jim ProcterJAL-4033 TODO re highlighting current column selection
2022-06-24 Jim ProcterJAL-2349 debugged and simplified (a little) the scaled...
2022-06-24 Jim ProcterJAL-3855 update EBI Alphafold barcoded URL generation...
2022-06-24 Jim ProcterJAL-2349 JAL-3855 resolve sequence position for contact...
2022-06-23 Ben SoaresMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
2022-06-23 Ben SoaresJAL-1988 Check for setHandler capability to avoid About...
2022-06-17 Ben SoaresJAL-3027 Avoid FlatLAF Desktop class is JalviewJS
2022-06-15 Jim ProcterJAL-4012 release notes for JAL-1988,JAL-3416
2022-06-15 Jim ProcterJAL-1988 JAL-3416 avoid unnecessary static flag
2022-06-15 Jim ProcterJAL-3418 JAL-1988 don’t need java version check anymore
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