jalview.git
2010-03-17 jproctersimple query anchored blast report parser (shh!)
2010-03-12 jprocter1.1 compatibility
2010-03-11 jprocterfiner column label format control and new 'scale label...
2010-03-11 jprocterdocumented new ROWPROPERTIES keyword.
2010-03-11 jprocterwarning for unresolvable database source strings (or...
2010-03-11 jprocterfeature settings type popup menu
2010-03-11 jproctergroup links menu documentation
2010-03-11 jprocterfiner column label format control and new 'scale label...
2010-03-11 jprocternew ROWPROPERTIES statement for setting an individual...
2010-03-11 jprocterpass any warning messages to StdErr - also todo to...
2010-03-11 jprocterraise a warning if column annotation gets truncated.
2010-03-11 jprocterindividual label format settings for each annotation...
2010-02-10 jproctertodos re adding groupUrl menu item code
2010-02-10 jprocterdas feature fetch followed by png output fixed (bug...
2010-02-10 jprocteronly need to remove progress bar if fetch wasn't cancel...
2010-02-10 jproctercommented out enfin/envision2 sequence submission URL...
2010-02-10 jprocterallow das fetch to be blocking or non-blocking (bug...
2010-02-10 jprocterprogress bar hashtable entry was not being removed...
2010-02-09 jproctergroupURL link prototype
2010-02-09 jproctergroupURL link preference variables
2010-02-09 jproctertodo
2010-02-09 jproctertoken replacement engine for generation of urls for...
2010-02-09 jprocterqsort objects on integers
2010-01-28 jprocterquick fix for very broken checkin - see Mantis bug...
2010-01-28 jproctertodo for bug #0058199
2010-01-28 jproctermore rigorous annotation row content check to limit...
2009-11-23 jprocterinitialise current and defaultAlignFrame and debug...
2009-11-13 jproctermake fileparse errors easier to debug by dumping file...
2009-11-11 jprocteradditional instructions and use of -jar for launching
2009-11-09 jproctermore spin on GA prompt
2009-11-09 jprocterno Vector(Vector) copy constructor in 1.2
2009-11-09 jprocteruser friendly GA and privacy statement
2009-11-06 jprocteronly append score if it is not NaN
2009-11-06 jprocterproperly import column selection from message
2009-11-06 jprocterpotential null pointer fix
2009-11-06 jproctersetting and merging selected columns from another selec...
2009-11-06 jprocterbetter formed generic select residue X expression
2009-11-04 jprocterempty row removed
2009-11-04 jprocterremoved duplicate descriptions, documented nodisplay...
2009-11-03 jprocterupdated dependencies and versions for example jnlp
2009-11-03 jprocterpasted file contents should never be added to the recen...
2009-11-02 jproctergracefully cope with non-standard nucleotide or amino...
2009-11-02 jproctergracefully cope with non-standard nucleotide or amino...
2009-10-30 jprocterna pdb: highlight any part of a residue, not just the...
2009-10-30 jprocterna pdb: recognise NA residue names
2009-10-30 jprocterna pdb: detect P backbone
2009-10-29 jprocteradd JGoogleAnalytics webstart resource
2009-10-27 jproctertodo
2009-10-27 jproctertypo
2009-10-27 jprocterfinish privacy statement
2009-10-27 jproctersynchronized documentation between development and...
2009-10-27 jprocterfix null pointer exception in redraw for short sequence...
2009-10-14 jprocterquick fix for nullpointer in column selection when...
2009-10-14 jprocterfix from acresso for black bg in inner panel
2009-10-13 jprocterfix for pfam files with empty annotation or sequence...
2009-10-13 jprocterprototype Java log window and sticky configuration
2009-10-13 jprocterdesktop window scaled to current window geometry, proto...
2009-10-13 jprocterprompt user to enable usage stats
2009-10-13 jprocteradded preferences for usage stats, questionnaire check...
2009-10-13 jprocteruse Pdb database source for fetching and warn user...
2009-10-13 jproctersafer OOM handling when importing from XML
2009-10-13 jprocterenact on a boolean configuration option, prompting...
2009-10-13 jprocterfix potential race condition
2009-10-13 jprocterdocumented privacy settings, versioncheck controlled...
2009-10-12 jprocterensure id string doesn't get set to the empty string...
2009-10-05 jprocterimmediately show memory usage
2009-09-22 jprocterallow the display character below a graph to be explici...
2009-09-10 jprocterfix null pointer exception when using blosum colourscheme
2009-09-03 jprocterallow middle-button drag to change height of annotation...
2009-08-25 jprocterjga browser string: java/version (arch; os version)
2009-08-24 jproctermodified JGA module to report java+version as user...
2009-08-21 jprocter1.1 compatibility
2009-08-21 jprocterrender sequence logo over consensus histogram
2009-08-21 jproctersingle-click highlights, double click selectes th assoc...
2009-08-21 jproctergroup consensus/conservation calculated from start...
2009-08-21 jprocterviewport setting for displaying sequence logos
2009-08-21 jprocterreversed order of addition of group consensus and conse...
2009-08-21 jprocterprototype make groups from selection function and shift...
2009-08-21 jprocterprototype make groups from selection function
2009-08-21 jprocternew sortbyPID for specific start/end region
2009-08-21 jprocterrace condition null pointer bugfix
2009-08-21 jprocterbugfix
2009-08-21 jproctertodo for 2.5
2009-08-21 jprocternull pointer exception bug fix
2009-08-21 jproctercommented debug lines indicating calculation progress
2009-08-21 jprocterstart/stop for per-group consensus calculation
2009-08-21 jprocterstore symbol profile and extract it for display
2009-08-21 jprocterpir format ambiguity and todo regarding 'format overrid...
2009-08-21 jprocterbasic implementation of profile display and todos
2009-08-21 jproctertodo
2009-08-21 jprocterroutines for creating groups over an alignment
2009-08-21 jprocterasparagine is polar but not charged
2009-08-03 jprocterfix feature creation for selected region beyond end...
2009-07-24 jprocterexplicitly grab all permissions for application executi...
2009-07-24 jprocterupdate annotation when group state is changed
2009-07-24 jproctershow group annotation menu entries
2009-07-24 jproctercolour by label prototype flag
2009-07-24 jproctercatch null pointer exception in headless context
2009-07-24 jprocterget consensus sequence and set ignore gaps flag for...
2009-07-24 jprocterannotation update method synchronises group annotation
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