jalview.git
2023-02-21 Ben SoaresJAL-4088 Updated j8libs/*.jar in THIRDPARTYLIBS
2023-02-20 Ben SoaresJAL-3416 Turn off (partial) flatlaf scaling for HiDPI...
2023-02-20 Ben SoaresJAL-4064 JAL-4054 Correct names of mac arch installer...
2023-02-20 Ben SoaresMerge branch 'develop' into improvement/JAL-4111_suffix... improvement/JAL-4111_suffixed_DEVELOP_channels
2023-02-20 Ben SoaresJAL-4128 Catch RasterFormatException caused whilst... bug/JAL-4128_resizing_overview_with_solid_drags_causes_exception
2023-02-20 Ben SoaresMerge branch 'develop' into bug/JAL-4125_flatlaf_quitha... bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
2023-02-16 James ProcterJAL-1713 don’t close an automatically created overview...
2023-02-15 James ProcterMerge branch 'develop' into feature/JAL-1713_overviewIn...
2023-02-15 James ProcterPassing test for JAL-4127 failing on the JAL-1713 branch
2023-02-15 James ProcterJAL-4090 move 2.11.3 series release notes to 2.11.3...
2023-02-13 Ben SoaresMerge branch 'develop' into bug/JAL-4125_flatlaf_quitha...
2023-02-13 Ben SoaresJAL-4125 Spanish translations
2023-02-13 Ben SoaresMerge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL...
2023-02-13 Ben SoaresJAL-4125 Move confirmation of closing external viewer...
2023-02-13 James ProcterMerge branch 'develop' into feature/JAL-1713_overviewIn...
2023-02-10 James ProcterJAL-3077 broken conflict resolve resulted in failing...
2023-02-10 James ProcterFix for JAL-4126 - don’t automatically create a thresho...
2023-02-10 James ProcterJAL-4126 comment out closeAll - so we can visually...
2023-02-10 James ProcterJAL-4126 failing test - colour scheme appears to be...
2023-02-09 Ben SoaresJAL-4125 Additions to JvOptionPane and QuitHandler...
2023-02-03 James ProcterJAL-1551 remove temp file in src
2023-02-03 James ProcterMerge branch 'develop' into features/r2_11_2_alphafold...
2023-01-31 James ProcterJAL-1713 update from Jalview 2.11.3 develop
2023-01-30 Ben SoaresJAL-1988 Make sensible choices if only the opening... merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064
2023-01-26 Ben SoaresJAL-4118 remove unnecessary sleep from QuitHandlerTest
2023-01-26 Ben SoaresJAL-4118 fix a small buglet in BackupFiles exhibited...
2023-01-26 Ben SoaresJAL-1988 Add a sleep to file save test to give time...
2023-01-25 James ProcterJAL-4116 relegate the failed to promote warning to...
2023-01-25 James ProcterMerge branch 'new_feature/JAL-4019_ambiguous_base_colou...
2023-01-24 James ProcterJAL-4090 Release 2.11.3.0 release notes and version...
2023-01-24 James ProcterMerge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL...
2023-01-24 James ProcterMerge branch 'develop' (JAL-4102 2.11.2.6 patch release... features/r2_11_2_alphafold/JAL-2349_JAL-3855
2023-01-23 James ProcterJAL-4104 JAL-4102 update help docs with script to add... Release_2_11_2_6
2023-01-23 Jim ProcterJAL-4102 whatsNew for 2.11.2.6
2023-01-20 Jim ProcterMerge branch 'patch/JAL-4114_updated_3dbeacons_api...
2023-01-20 Jim ProcterJAL-4114 model_page_url not required in v2.0 response patch/JAL-4114_updated_3dbeacons_api
2023-01-20 Jim ProcterJAL-4102 update date and release notes for 2.11.2.6
2023-01-20 Jim ProcterMerge branch 'patch/JAL-4114_updated_3dbeacons_api...
2023-01-20 Jim ProcterMerge branch 'patch/Release_2_11_2_6_Branch' into develop
2023-01-20 Jim ProcterJAL-2353 primary ref candidates that should be promoted... patch/Release_2_11_2_6_Branch
2023-01-20 Jim ProcterJAL-4114 missing mock server response
2023-01-20 Jim ProcterJAL-4114 only rank model qualities that are computed...
2023-01-20 Jim ProcterJAL-4114 alphafold now marked as AB-INITIO so adjust...
2023-01-20 Jim ProcterJAL-4114 additional warnings when PDBe doesn’t return...
2023-01-20 Jim ProcterJAL-4114 patch REST client for changed JSON schema...
2023-01-20 Jim ProcterJAL-4114 formatting
2023-01-20 Jim ProcterJAL-4114 updated mock tests and responses for v2.0 api
2023-01-17 Ben SoaresJAL-3416 No longer needed
2023-01-17 Ben SoaresMerge branch 'develop' into merge/JAL-1988_JAL-3772...
2023-01-16 Ben SoaresJAL-3416 More tweaking of FlatLaf. Problem with macOS...
2023-01-11 Ben SoaresJAL-1988 JAL-3772 Mark the _default_ STARTUP_FILE as...
2023-01-06 Ben SoaresJAL-3416 More explicit setting of FlatLaf macOS theme
2023-01-06 Ben SoaresJAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme...
2023-01-06 Ben SoaresJAL-3416 remove a missed panel titlebar icon in TreePanel
2023-01-06 Ben SoaresJAL-3416 Fix file permissions on bundled macOS JREs
2023-01-06 Ben SoaresJAL-4111 Added commit and date text to splashscreens...
2023-01-05 Ben SoaresJAL-4111 improvement to convert -draw argument
2023-01-05 Ben SoaresJAL-4111 Use ImageMagick to add commit and build time...
2023-01-05 Ben SoaresJAL-4111 Fixed channel.props to allow replacement of...
2023-01-05 Benedict Soares... JAL-4111 fixed DMG background image for generic Develop...
2022-12-22 Ben SoaresJAL-4111 Allow -PCHANNEL=DEVELOP-version for new appbas...
2022-11-30 Jim ProcterJAL-4102 bump version number
2022-11-30 Jim ProcterJAL-4102 2.11.2.6 hotfix release notes - JAL-4101 JAL...
2022-11-30 Ben SoaresJAL-4101 Updated Rfam* tests
2022-11-30 Ben SoaresJAL-4101 Updated DEFAULT_RFAM_BASEURL
2022-11-30 Jim ProcterJAL-2353 patch for Ensembl refs from uniprot - needs...
2022-11-29 Ben SoaresJAL-4101 Updated Rfam* tests
2022-11-29 Ben SoaresJAL-4101 Updated DEFAULT_RFAM_BASEURL
2022-11-17 Ben SoaresJAL-4019 Clarification of position on 'X' in help text
2022-11-16 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
2022-11-16 Ben SoaresJAL-3416 make flatlaf default for linux improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf
2022-11-16 Ben SoaresJAL-4019 finalised a boolean option and tidied some...
2022-11-14 Ben SoaresJAL-4019 Put original test back
2022-11-14 Ben SoaresJAL-4019 Make diagnostic message debug level
2022-11-13 Ben SoaresJAL-4019 small colour fix for X in the documentation
2022-11-13 Ben SoaresJAL-4019 attribution to Suzanne
2022-11-13 Ben SoaresJAL-4019 Help pages for Nucleotide Ambiguity colour...
2022-11-13 Ben SoaresJAL-4019 small but important corrections to array order...
2022-11-13 Ben SoaresJAL-4019 Added tests for new Nucleotide sequence detection
2022-11-13 Ben SoaresJAL-4019 improvement to short sequence nucleotide detec...
2022-11-10 Ben SoaresJAL-4019 Nucleotide Ambiguity Colour Scheme added....
2022-11-09 Ben SoaresJAL-3416 Add necessary logo to non-internal Frames
2022-11-09 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
2022-11-09 Ben SoaresJAL-3416 Add necessary logo to non-internal Frames
2022-11-09 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
2022-11-09 Ben SoaresJAL-3416 Remove all JFrame/JInternalFrame icons (set...
2022-11-09 Ben SoaresMerge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl...
2022-11-09 Ben SoaresJAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving... bug/JAL-1988_JAL-3772_improved_quit_handling
2022-11-08 Ben SoaresMerge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl...
2022-11-08 Ben SoaresJAL-1988 JAL-3776 Formatting JvOptionPane
2022-11-08 Ben SoaresJAL-1988 JAL-3772 Tests for various quitting scenarios
2022-11-08 Ben SoaresJAL-1988 JAL-3772 Fixes highlighted by tests
2022-11-04 Ben SoaresMerge branch 'merge/JAL-4054+JAL-4064' into ben-big...
2022-11-04 Ben SoaresJAL-3416 Added logoIcon to quit (and potentially other...
2022-11-04 Ben SoaresJAL-1998 JAL-3772 JAL-3416 Merge conflict resolution...
2022-11-04 Ben SoaresJAL-4064 JAL-4054 Combined install4j10 template with... improvement/JAL-4064_Addition_of_macOS_AARCH64_native_DMG
2022-11-04 Ben SoaresJAL-4054 Altered file association templates and generat...
2022-11-03 Ben SoaresJAL-3416 File Chooser iconified, JvOptionPanes iconifie...
2022-11-03 Jim ProcterJAL-3855 JAL-4095 simple picking of ranges adjacent...
2022-11-03 Ben SoaresJAL-1988 JAL-3772 Allow other window closing dialogs...
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