jalview.git
2015-07-08 gmungocJAL-1759 merge from develop
2015-07-03 gmungocJAL-1759 updated Jmol version in nbproject, install...
2015-07-01 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate
2015-07-01 gmungocJAL-1799 deduct more space for decorators on Windows
2015-07-01 gmungocJAL-1619 align the added sequences to match what they...
2015-06-30 gmungocJAL=1759 fix Jmol state command bug; remove debug output
2015-06-30 gmungocJAL-1759 unused JmolPopup removed, code tidy for generics
2015-06-30 gmungocJAL-1759 deprecated EnfinEnvision2OneWay removed
2015-06-30 gmungocJAL-1759 JMol now Jmol !
2015-06-30 gmungocJAL-1759 unused field / methods removed
2015-06-30 tcofoegbuMerge branch 'features/JAL-1641_JSON-tests-and-docs...
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even...
2015-06-29 gmungocJAL-1799 adjusted annotation height calculation
2015-06-29 gmungocJAL-1759 correct conversion of Jmol Chain.chainId ...
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor
2015-06-26 gmungocJAL-1759 changed to non-deprecated Viewer.renderScreenI...
2015-06-26 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate
2015-06-26 gmungocJAL-1759 updates for Jmol 14.2.14_25.06.11
2015-06-26 tcofoegbumerge
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog...
2015-06-25 Jim ProcterJAL-1691 avoid NPE when original split frame has been...
2015-06-25 Jim ProcterJAL-1780 JAL-653 JAL-1892 brackets in wrong place broke...
2015-06-24 Jim ProcterMerge branch 'features/JAL-1370_patchshowunconserved...
2015-06-24 Jim ProcterJAL-1790 fix: javac.source=1.7 and javac.target=1.7...
2015-06-24 Jim ProcterJAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation
2015-06-24 Jim ProcterMerge branch 'merge/develop_JAL-1780_JAL-653_JAL-1892...
2015-06-23 Jim ProcterJAL-1780 JAL-653 jim forgot to put the conditional... merge/develop_JAL-1780_JAL-653_JAL-1892
2015-06-23 Jim ProcterJAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
2015-06-22 Jim ProcterJAL-1270 fix logic in stockholm test allowing annotatio...
2015-06-22 Jim ProcterJAL-653 JAL-1780 JAL-1140 added RNAML example alignment...
2015-06-22 Jim ProcterJAL-653 JAL-1780 dropped unnecessary refs
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports
2015-06-22 gmungocJAL-892 tidy Varna panel names; JAL-1789 simplified...
2015-06-22 gmungocJAL-893 upgrade to VARNAv3-93.jar
2015-06-19 Jim ProcterJAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfil...
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports
2015-06-19 gmungocJAL-892 check viewer is linked to alignment panel on...
2015-06-19 Jim ProcterJAL-653 JAL-1780 minimise call rate now av.hasHiddenRow...
2015-06-19 Jim ProcterJAL-653 JAL-1780 dropped av.setHasHiddenRows() and...
2015-06-19 tcofoegbuJAL-1270 test suits import order refactor features/JAL-1270_JUnit-to-TestNG features/JAL-1782_JUnit-to-TestNG
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring
2015-06-18 Jim ProcterJAL-653 patch broken test code - test still not passing
2015-06-18 Jim ProcterJAL-653 JAL-1780 JAL-1543 javadoc and comment about...
2015-06-18 Jim ProcterJAL-653 JAL-1780 javadoc for FeatureRenderer prior...
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference...
2015-06-18 gmungocJAL-1270 test added
2015-06-18 gmungocJAL-1544 typos in comments
2015-06-18 gmungocJAL-892 JAL-1779 save/restore Varna viewer to/from...
2015-06-18 gmungocJAL-1695 default ENABLE_SPLIT_FRAME to true for desktop
2015-06-18 gmungocJAL-892 schema changes (rnaViewer) for save Varna to...
2015-06-18 gmungocJAL-1781 annotation.sequenceRef now sequence id not... features/JAL-1781annotationXmlIds
2015-06-17 Jim ProcterJAL-1784 minimise data duplication, and report out...
2015-06-17 Jim ProcterJAL-1784 refactor parse method to directly parse FilePa...
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into...
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export...
2015-06-17 Jim ProcterJAL-1783 add java 1.7 and 1.8 class numbers
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export...
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile
2015-06-17 tcofoegbuJAL-1780 Export settings for flatfile output
2015-06-17 gmungocJAL-1588 restore ChimeraViewFrame geometry as well
2015-06-17 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-17 gmungocJAL-1778 reinstated this.ssm to handle 'close all windo...
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
2015-06-15 Jim ProcterJAL-1665 patch for regression: failing jalview.ws.jabaw...
2015-06-15 Jim ProcterJAL-1775 patch for regression from Anne Menard’s pseudo...
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
2015-06-15 Jim ProcterJAL-1775 patch regression bug when displayChar is null...
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
2015-06-15 Jim Procterfix for JAL-1775 (and reorganise imports)
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
2015-06-15 Jim ProcterJAL-1775 test demonstrating bug
2015-06-15 Jim ProcterJAL-1775 FileLoader javadoc
2015-06-15 Jim ProcterJAL-1775 fix regression from commit 70f9c4700f20a8fa57e...
2015-06-15 Jim ProcterMerge branch 'develop' into bug/JAL-1775
2015-06-15 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-15 gmungocJAL-1778 deregister as a listener when panel closed
2015-06-15 Jim ProcterJAL-1775 fix broken test due to missing file (RF0031_un...
2015-06-15 tcofoegbuJAL-1641 clean up
2015-06-15 tcofoegbuJAL-1641 docs for ComplexAlignFile interface
2015-06-15 tcofoegbuclean up
2015-06-12 tcofoegbumerge
2015-06-12 tcofoegbuJAL-1627 removed extra spaces at end of tooltip
2015-06-12 tcofoegbuJAL-1641 refactor
2015-06-10 tcofoegbuupdated build.xml
2015-06-10 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-10 gmungocMerge remote-tracking branch
2015-06-10 tcofoegbumerge
2015-06-10 tcofoegbuJAL-1641 updated applet version
2015-06-10 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-10 gmungocJAL-1764 save Chimera/Jmol state as separate entries...
2015-06-10 Jim ProcterJAL-1764 add structure view type attribute to project... schema/JAL-1764_structureViewAttribute
2015-06-09 tcofoegbumerge commit
2015-06-09 tcofoegbuJAL-1488 bug-fix for incorrect start/end position in...
2015-06-08 gmungocJAl-1421 fix method reflection argument (properly this...
2015-06-08 gmungocJAL-1421 undid premature 'improvement' of method parame...
2015-06-07 Jim ProcterJAL-429 remove pointless code from phylip parser features/JAL-653_rebased_gffalignments
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