source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	1847	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	177744	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30121	AlignViewport.java	blob \| history \| raw
-rw-r--r--	47634	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13913	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26295	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8604	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32177	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24804	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9155	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	33759	AppJmol.java	blob \| history \| raw
-rw-r--r--	5052	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19365	AppVarna.java	blob \| history \| raw
-rw-r--r--	16002	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2710	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23187	BlogReader.java	blob \| history \| raw
-rw-r--r--	38769	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16451	Console.java	blob \| history \| raw
-rw-r--r--	5982	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	8501	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22912	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	85914	Desktop.java	blob \| history \| raw
-rw-r--r--	4224	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2620	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15518	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12781	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50612	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10095	Finder.java	blob \| history \| raw
-rwxr-xr-x	9418	FontChooser.java	blob \| history \| raw
-rw-r--r--	3320	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11844	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12937	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3954	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14973	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	167666	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15368	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2620	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4237	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8372	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2642	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23792	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11341	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19766	PCAPanel.java	blob \| history \| raw
-rw-r--r--	8531	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3978	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	74621	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	32146	Preferences.java	blob \| history \| raw
-rw-r--r--	6085	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6141	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7896	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15667	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16642	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4179	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12725	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23226	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	48297	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26073	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13933	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8354	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9200	SplashScreen.java	blob \| history \| raw
-rw-r--r--	18268	SplitFrame.java	blob \| history \| raw
-rw-r--r--	26833	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6253	StructureViewer.java	blob \| history \| raw
-rw-r--r--	5081	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5743	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24972	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23061	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26727	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5291	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35054	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8289	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	21906	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43092	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9724	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17578	WsPreferences.java	blob \| history \| raw