source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	2985	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	172454	AlignFrame.java	blob \| history \| raw
-rw-r--r--	32446	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48903	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18559	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13920	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26129	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9353	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35436	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	28153	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	10142	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	31954	AppJmol.java	blob \| history \| raw
-rw-r--r--	5023	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19358	AppVarna.java	blob \| history \| raw
-rw-r--r--	13959	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2752	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23344	BlogReader.java	blob \| history \| raw
-rw-r--r--	33653	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16944	Console.java	blob \| history \| raw
-rw-r--r--	10575	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6123	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10654	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	23241	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	92656	Desktop.java	blob \| history \| raw
-rw-r--r--	4202	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2800	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15493	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	13262	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	51652	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10087	Finder.java	blob \| history \| raw
-rwxr-xr-x	9477	FontChooser.java	blob \| history \| raw
-rw-r--r--	4163	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2762	Help.java	blob \| history \| raw
-rw-r--r--	1728	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1210	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11800	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	13640	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3946	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15700	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	175644	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15306	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1932	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2984	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3500	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4279	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8370	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2883	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2606	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24398	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1015	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	12285	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20172	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6330	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3980	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	70399	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	34263	Preferences.java	blob \| history \| raw
-rw-r--r--	6957	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6311	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7945	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7590	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15651	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17208	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4157	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	13982	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23412	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	50919	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	30731	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14217	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8459	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9300	SplashScreen.java	blob \| history \| raw
-rw-r--r--	22185	SplitFrame.java	blob \| history \| raw
-rw-r--r--	36202	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6235	StructureViewer.java	blob \| history \| raw
-rw-r--r--	13258	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	6032	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26326	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23595	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26966	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5317	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35365	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8281	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22001	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43158	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9961	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17563	WsPreferences.java	blob \| history \| raw