compbio.data.sequence
Class ScoreManager
java.lang.Object
compbio.data.sequence.ScoreManager
public class ScoreManager
- extends Object
SINGLE_ENTRY_KEY
public static final String SINGLE_ENTRY_KEY
- See Also:
- Constant Field Values
newInstance
public static ScoreManager newInstance(Map<String,Set<Score>> data)
newInstanceSingleScore
public static ScoreManager newInstanceSingleScore(Map<String,Score> seqScoresMap)
newInstanceSingleSequence
public static ScoreManager newInstanceSingleSequence(Set<Score> data)
asMap
public Map<String,TreeSet<Score>> asMap()
asSet
public Set<Score> asSet()
getNumberOfSeq
public int getNumberOfSeq()
getAnnotationForSequence
public ScoreManager.ScoreHolder getAnnotationForSequence(String seqId)
writeOut
public void writeOut(Writer outStream)
throws IOException
- Throws:
IOException
hashCode
public int hashCode()
- Overrides:
hashCode
in class Object
equals
public boolean equals(Object obj)
- Overrides:
equals
in class Object