compbio.runner
Class OptionCombinator

java.lang.Object
  compbio.runner.OptionCombinator

@Immutable
public final class OptionCombinator
extends Object

This class solve the following problems. Given the RunnerConfig 1) generate a valid option string with all options and parameters in it 2) Permute all possible combinations of options order and parameters values

Author:

pvtroshin

Constructor Summary

OptionCombinator(RunnerConfig<? extends Executable<?>> rconfig)

Method Summary

List<String>	argumentsToCommandString(List<? extends Option<?>> arguments)
static List<String>	argumentsToCommandString(List<? extends Option<?>> arguments, RunnerConfig<? extends Executable<?>> rconfig)
Map<Parameter<?>,String>	getAllConstrainedParametersWithBorderValues(boolean minValue)
Map<Parameter<?>,String>	getAllConstrainedParametersWithRandomValues()
List<Option<?>>	getAllOptions()
List<Parameter<?>>	getAllParameters()
List<String>	getOptionsAtRandom()
List<String>	optionsToCommandString(List<Option<?>> options)
List<String>	parametersToCommandString(List<Parameter<?>> orderedList, Map<Parameter<?>,String> prmValue)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OptionCombinator

public OptionCombinator(RunnerConfig<? extends Executable<?>> rconfig)

Method Detail

optionsToCommandString

public List<String> optionsToCommandString(List<Option<?>> options)

getOptionsAtRandom

public List<String> getOptionsAtRandom()

getAllOptions

public List<Option<?>> getAllOptions()

getAllParameters

public List<Parameter<?>> getAllParameters()

argumentsToCommandString

public List<String> argumentsToCommandString(List<? extends Option<?>> arguments)

argumentsToCommandString

public static List<String> argumentsToCommandString(List<? extends Option<?>> arguments,
                                                    RunnerConfig<? extends Executable<?>> rconfig)

parametersToCommandString

public List<String> parametersToCommandString(List<Parameter<?>> orderedList,
                                              Map<Parameter<?>,String> prmValue)

getAllConstrainedParametersWithBorderValues

public Map<Parameter<?>,String> getAllConstrainedParametersWithBorderValues(boolean minValue)

getAllConstrainedParametersWithRandomValues

public Map<Parameter<?>,String> getAllConstrainedParametersWithRandomValues()