compbio.runner._impl
Class Runners

java.lang.Object
  compbio.runner._impl.Runners

public final class Runners
extends java.lang.Object

Method Summary

static BlastAll	getBlastAllRunnable(java.lang.String workDirectory)
static Disembl	getDisemblRunnable(java.lang.String workDirectory)
static Mcl	getMclRunnable(java.lang.String workDirectory)
static NetNglyc	getNetNglycRunnable(java.lang.String workDirectory)
static OB	getOBRunnable(java.lang.String workDirectory)
static PSIBlast	getPSIBlastRunnable(java.lang.String workDirectory)
static Ronn	getRonnRunnable(java.lang.String workDirectory)
static RPSBlast	getRPSBlastRunnable(java.lang.String workDirectory)
static compbio.runner._impl.Tmhmm2	getTmhmm2Runnable(java.lang.String workDirectory)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getMclRunnable

public static Mcl getMclRunnable(java.lang.String workDirectory)

getOBRunnable

public static OB getOBRunnable(java.lang.String workDirectory)

getDisemblRunnable

public static Disembl getDisemblRunnable(java.lang.String workDirectory)

getNetNglycRunnable

public static NetNglyc getNetNglycRunnable(java.lang.String workDirectory)

getRonnRunnable

public static Ronn getRonnRunnable(java.lang.String workDirectory)

getTmhmm2Runnable

public static compbio.runner._impl.Tmhmm2 getTmhmm2Runnable(java.lang.String workDirectory)

getRPSBlastRunnable

public static RPSBlast getRPSBlastRunnable(java.lang.String workDirectory)

getBlastAllRunnable

public static BlastAll getBlastAllRunnable(java.lang.String workDirectory)

getPSIBlastRunnable

public static PSIBlast getPSIBlastRunnable(java.lang.String workDirectory)