A B C D E F G H I J K L M N O P R S T U V W _

L

Limit<T> - Class in compbio.metadata

A value object containing a maximum number of sequences and a maximum average sequence length for a preset.

Limit(int, int, String) - Constructor for class compbio.metadata.Limit

Instantiate the limit

Limit(int, int, String, boolean) - Constructor for class compbio.metadata.Limit

LimitExceededException - Exception in compbio.metadata

This exception is thrown if the task larger in size that the limit that applies to the calculation.

LimitExceededException(String) - Constructor for exception compbio.metadata.LimitExceededException

LimitExceededExceptionBean - Class in compbio.data.msa.jaxws

This class was generated by the JAX-WS RI.

LimitExceededExceptionBean() - Constructor for class compbio.data.msa.jaxws.LimitExceededExceptionBean

LimitsManager<T> - Class in compbio.metadata

A collection of Limits

LimitsManager() - Constructor for class compbio.metadata.LimitsManager

load(InputStream) - Static method in class compbio.engine.client.RunConfiguration

LoadBalancer - Class in compbio.engine

This class decides where to execute the job.

loadExecutable(String) - Static method in class compbio.engine.client.Util

loadRunConfiguration(RunConfiguration) - Method in class compbio.engine.client.ConfExecutable

loadRunConfiguration(InputStream) - Method in class compbio.engine.client.ConfExecutable

loadRunConfiguration(InputStream) - Method in interface compbio.engine.client.ConfiguredExecutable

loadRunConfiguration(RunConfiguration) - Method in interface compbio.engine.client.Executable

loadRunConfiguration(RunConfiguration) - Method in class compbio.engine.client.SkeletalExecutable

loadRunConfiguration(RunConfiguration) - Method in class compbio.runner._impl.NetNglyc

loadRunConfiguration(RunConfiguration) - Method in class compbio.runner._SkeletalCommandBuilder

Deprecated.

LOCAL_ENGINE_LIMIT_PRESET - Static variable in class compbio.metadata.PresetManager

LOCAL_WORK_DIRECTORY - Static variable in class compbio.engine.Configurator

LocalEngineUtil - Class in compbio.engine.local

LocalEngineUtil() - Constructor for class compbio.engine.local.LocalEngineUtil

LocalExecutorService - Class in compbio.engine.local

LocalRunner - Class in compbio.engine.local

LocalRunner(ConfiguredExecutable<?>) - Constructor for class compbio.engine.local.LocalRunner

log - Static variable in class compbio.runner.Util

log(Timer, String) - Method in class compbio.ws.server._WSLogger

Deprecated.

log(Timer, String, String) - Method in class compbio.ws.server._WSLogger

Deprecated.

logAll(Timer, String) - Method in class compbio.ws.server._WSLogger

Deprecated.

logFine(Timer, String) - Method in class compbio.ws.server._WSLogger

Deprecated.

LOOPS_EXPECTATION_THRESHOLD - Variable in class compbio.runner.disorder.Disembl