build-server: [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/ClustalWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/ClustalWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/DisemblWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/DisemblWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/GLprobsWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/GlobPlotWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/GlobPlotWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/IUPredWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/IUPredWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JpredWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JronnWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JronnWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MSAprobsWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MafftWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MafftWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MsaWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MsaWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MuscleWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MuscleWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RNAalifoldWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RNAalifoldWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RegistryWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RegistryWS_schema1.xsd [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/TcoffeeWS_schema1.xsd [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JpredWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.AAConWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MSAprobsWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.GLprobsWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.ClustalWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MuscleWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MafftWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.TcoffeeWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS] [wsgen] [should process method: align hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: align(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align] [wsgen] [should process method: customAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAlign(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign] [wsgen] [should process method: presetAlign hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAlign(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign] [wsgen] [should process method: getResult hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getResult(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Align.java [wsgen] compbio/data/msa/jaxws/AlignResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAlign.java [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetResult.java [wsgen] compbio/data/msa/jaxws/GetResultResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAlign.java [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.DisemblWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.GlobPlotWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JronnWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.IUPredWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RegistryWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.RegistryWS] [wsgen] [should process method: getSupportedServices hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getSupportedServices()] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetSupportedServices] [wsgen] [should process method: getLastTested hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLastTested(compbio.ws.client.Services)] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTested] [wsgen] [should process method: getLastTestedOn hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLastTestedOn(compbio.ws.client.Services)] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTestedOn] [wsgen] [should process method: testAllServices hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: testAllServices()] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestAllServices] [wsgen] [should process method: testService hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: testService(compbio.ws.client.Services)] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestService] [wsgen] [should process method: isOperating hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: isOperating(compbio.ws.client.Services)] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.IsOperating] [wsgen] [should process method: getServiceDescription hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getServiceDescription(compbio.ws.client.Services)] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceDescription] [wsgen] [should process method: getServiceCategories hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getServiceCategories()] [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceCategories] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] compbio/data/msa/jaxws/GetLastTested.java [wsgen] compbio/data/msa/jaxws/GetLastTestedOn.java [wsgen] compbio/data/msa/jaxws/GetLastTestedOnResponse.java [wsgen] compbio/data/msa/jaxws/GetLastTestedResponse.java [wsgen] compbio/data/msa/jaxws/GetServiceCategories.java [wsgen] compbio/data/msa/jaxws/GetServiceCategoriesResponse.java [wsgen] compbio/data/msa/jaxws/GetServiceDescription.java [wsgen] compbio/data/msa/jaxws/GetServiceDescriptionResponse.java [wsgen] compbio/data/msa/jaxws/GetSupportedServices.java [wsgen] compbio/data/msa/jaxws/GetSupportedServicesResponse.java [wsgen] compbio/data/msa/jaxws/IsOperating.java [wsgen] compbio/data/msa/jaxws/IsOperatingResponse.java [wsgen] compbio/data/msa/jaxws/TestAllServices.java [wsgen] compbio/data/msa/jaxws/TestAllServicesResponse.java [wsgen] compbio/data/msa/jaxws/TestService.java [wsgen] compbio/data/msa/jaxws/TestServiceResponse.java [wsgen] Note: ap round: 2 [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RNAalifoldWS [wsgen] Note: ap round: 1 [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation] [wsgen] [should process method: analize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: analize(java.util.List)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize] [wsgen] [should process method: customAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: customAnalize(java.util.List,java.util.List>)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize] [wsgen] [should process method: presetAnalize hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: presetAnalize(java.util.List,compbio.metadata.Preset)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize] [wsgen] [should process method: getAnnotation hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: true] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService] [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement] [wsgen] [should process method: cancelJob hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: cancelJob(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob] [wsgen] [should process method: getJobStatus hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus] [wsgen] [should process method: pullExecStatistics hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)] [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement] [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics] [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata] [wsgen] [should process method: getRunnerOptions hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getRunnerOptions()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions] [wsgen] [should process method: getPresets hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getPresets()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets] [wsgen] [should process method: getLimit hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimit(java.lang.String)] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit] [wsgen] [should process method: getLimits hasWebMethods: false ] [wsgen] [endpointReferencesInterface: true] [wsgen] [declaring class has WebSevice: false] [wsgen] [returning: true] [wsgen] [WrapperGen - method: getLimits()] [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata] [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits] [wsgen] compbio/data/msa/jaxws/Analize.java [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java [wsgen] compbio/data/msa/jaxws/CancelJob.java [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java [wsgen] compbio/data/msa/jaxws/CustomAnalize.java [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/GetAnnotation.java [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java [wsgen] compbio/data/msa/jaxws/GetJobStatus.java [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java [wsgen] compbio/data/msa/jaxws/GetLimit.java [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java [wsgen] compbio/data/msa/jaxws/GetLimits.java [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java [wsgen] compbio/data/msa/jaxws/GetPresets.java [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java [wsgen] compbio/data/msa/jaxws/PresetAnalize.java [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java [wsgen] Note: ap round: 2 BUILD SUCCESSFUL Total time: 9 seconds