X-Git-Url: http://source.jalview.org/gitweb/?p=jabaws.git;a=blobdiff_plain;f=engine%2Fcompbio%2Fengine%2Fclient%2FCommandBuilder.java;h=db5992b20efe6ef9cec7cff67f06073b9b4b8d33;hp=dae669602c9171395d70b79570547e9533c4b314;hb=ba2d4e920e433bd080f448248e7dacade69a27a0;hpb=9f81a03cf11728726a45917773e3c42195b471c2

diff --git a/engine/compbio/engine/client/CommandBuilder.java b/engine/compbio/engine/client/CommandBuilder.java
index dae6696..db5992b 100644
--- a/engine/compbio/engine/client/CommandBuilder.java
+++ b/engine/compbio/engine/client/CommandBuilder.java
@@ -116,9 +116,10 @@ public class CommandBuilder<T> {
 	}
 
 	boolean setParam(Parameter param) {
-		boolean overriden= paramList.put(param.name, param) != null;
-		if(overriden) {
-			log.warn("Key " + param.name + " in the command list has been overriden! ");
+		boolean overriden = paramList.put(param.name, param) != null;
+		if (overriden) {
+			log.warn("Key " + param.name
+					+ " in the command list has been overriden! ");
 		}
 		return overriden;
 	}
@@ -137,10 +138,9 @@ public class CommandBuilder<T> {
 		// paramValue!
 		// e.g. paramName could be a path to the file with spaces
 		if (paramValue != null && paramName.contains(nameValueSeparator)) {
-			log
-					.warn("WARN: paramName "
-							+ paramName
-							+ " contains nameValue separator. Removing the separator...");
+			log.warn("WARN: paramName "
+					+ paramName
+					+ " contains nameValue separator. Removing the separator...");
 			paramName = paramName.trim().substring(0, paramName.length() - 1);
 		}
 		if (paramValue != null && paramName.contains(nameValueSeparator)) {
@@ -163,7 +163,7 @@ public class CommandBuilder<T> {
 	}
 
 	public boolean setParam(String paramName, String paramValue) {
-		return setParam( new Parameter(paramName, paramValue));
+		return setParam(new Parameter(paramName, paramValue));
 	}
 
 	public List<String> getCommands() {
@@ -198,7 +198,7 @@ public class CommandBuilder<T> {
 	 * is that it accepts a List of Options as an input
 	 * 
 	 * @param arguments
-	 * @return
+	 * @return the instance of the CommandBuilder
 	 */
 	public static <T> CommandBuilder<T> newCommandBuilder(
 			List<? extends Option<T>> arguments, String nameValueSeparator) {
@@ -216,7 +216,7 @@ public class CommandBuilder<T> {
 	}
 
 	boolean isWhiteSpaceSeparator() {
-		return nameValueSeparator.trim().length()==0;
+		return nameValueSeparator.trim().length() == 0;
 	}
 
 	List<Parameter> getCommandList() {