git://source.jalview.org / jabaws.git / commit
? search:
summary | shortlog | log | commit | commitdiff | tree
(parent: 52c7292) | patch
JWS-112 Hotfix the last t-coffee version 11. The -mode quickaln preset breaks if...
authorFábio Madeira <fmmarquesmadeira@dundee.ac.uk>
Thu, 18 May 2017 11:00:56 +0000 (12:00 +0100)
committerFábio Madeira <fmmarquesmadeira@dundee.ac.uk>
Thu, 18 May 2017 11:44:28 +0000 (12:44 +0100)
commite8d7803afda8d4346a66f44cc7d5bd1cfd3fd81d
tree6a4494d7aabc05da2ee3149d62e21e17eb6c0385tree | snapshot
parent52c72920153b890075fdccb25333815608afca0ecommit | diff
JWS-112 Hotfix the last t-coffee version 11. The -mode quickaln preset breaks if ’t_coffee’ is not found in $PATH. By calling t_coffee.sh instead, the problem is fixed by updating the $PATH on the flight and passing the original arguments to t_coffee.
binaries/src/compilebin.sh diff | blob | history
binaries/src/tcoffee/t_coffee_source/t_coffee.sh [new file with mode: 0644] blob
conf/Executable.properties diff | blob | history
conf/Executable.properties.dundee diff | blob | history