From: pvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Date: Thu, 25 Aug 2011 15:46:49 +0000 (+0000)
Subject: An attempt to automatically make binaries executables - not successful but the code... 
X-Git-Url: http://source.jalview.org/gitweb/?p=jabaws.git;a=commitdiff_plain;h=0fe28c8386f1c1d7c7cd09c927693c465f5f1ab2

An attempt to automatically make binaries executables - not successful but the code is commented out and let in for future use

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4548 e3abac25-378b-4346-85de-24260fe3988d
---

diff --git a/engine/compbio/engine/client/Util.java b/engine/compbio/engine/client/Util.java
index aff3ca5..5eda4b6 100644
--- a/engine/compbio/engine/client/Util.java
+++ b/engine/compbio/engine/client/Util.java
@@ -253,6 +253,16 @@ public final class Util {
 		} else {
 			bin = ph.getProperty("cluster." + execCommandName + ".bin");
 		}
+		// Could have done: Set executable flag if not set
+		// but - do not because in some cases more than one file must be made
+		// executable!
+		/*
+		 * if (!compbio.util.Util.isEmpty(bin)) { File command = new File(bin);
+		 * if (!command.canExecute()) { log.debug(
+		 * "The command line binary is not executable! (just unpacked from war file? )"
+		 * ); log.debug("Attempting to set executable flag for command: " +
+		 * bin); command.setExecutable(true, false); } }
+		 */
 		log.debug("Using executable: " + bin);
 		return bin; // File.separator
 	}