From c97b1954611988b2b1d2e9aeec6e4b0696a0ab66 Mon Sep 17 00:00:00 2001 From: pvtroshin Date: Thu, 11 Aug 2011 15:00:30 +0000 Subject: [PATCH] Change header template for a new version git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4494 e3abac25-378b-4346-85de-24260fe3988d --- runner/compbio/data/_structure/JnetAnnotation.java | 4 +-- .../compbio/data/_structure/JpredAnnotation.java | 4 +-- runner/compbio/data/_structure/JpredResult.java | 4 +-- .../pipeline/_jpred/BlastBlastComparator.java | 4 +-- .../pipeline/_jpred/BlastHmmerComparator.java | 4 +-- runner/compbio/pipeline/_jpred/BlastParser.java | 4 +-- runner/compbio/pipeline/_jpred/Hit.java | 4 +-- .../pipeline/_jpred/JackHmmerHitParser.java | 4 +-- runner/compbio/pipeline/_jpred/Jpred4.java | 4 +-- runner/compbio/pipeline/_jpred/PScore.java | 4 +-- runner/compbio/pipeline/_jpred/Pairwise.java | 4 +-- runner/compbio/runner/OptionCombinator.java | 4 +-- runner/compbio/runner/Util.java | 4 +-- runner/compbio/runner/_NativeSpecHelper.java | 4 +-- runner/compbio/runner/_SkeletalCommandBuilder.java | 4 +-- runner/compbio/runner/_impl/BlastAll.java | 4 +-- runner/compbio/runner/_impl/BlastParameters.java | 4 +-- runner/compbio/runner/_impl/Environment.java | 4 +-- runner/compbio/runner/_impl/Mcl.java | 4 +-- runner/compbio/runner/_impl/NetNglyc.java | 4 +-- runner/compbio/runner/_impl/OB.java | 4 +-- runner/compbio/runner/_impl/PSIBlast.java | 4 +-- runner/compbio/runner/_impl/RPSBlast.java | 4 +-- runner/compbio/runner/_impl/Ronn.java | 4 +-- runner/compbio/runner/_impl/Runners.java | 4 +-- runner/compbio/runner/_impl/Tmhmm2.java | 4 +-- runner/compbio/runner/_jpred/_Jpred.java | 17 ++++++++++++ runner/compbio/runner/conservation/AACon.java | 28 +++++++++++--------- runner/compbio/runner/disorder/Jronn.java | 4 +-- runner/compbio/runner/msa/ClustalO.java | 4 +-- runner/compbio/runner/msa/ClustalW.java | 4 +-- runner/compbio/runner/msa/Mafft.java | 4 +-- runner/compbio/runner/msa/Muscle.java | 4 +-- runner/compbio/runner/msa/Probcons.java | 4 +-- runner/compbio/runner/msa/Tcoffee.java | 4 +-- 35 files changed, 99 insertions(+), 78 deletions(-) diff --git a/runner/compbio/data/_structure/JnetAnnotation.java b/runner/compbio/data/_structure/JnetAnnotation.java index 8e493a5..93f2861 100644 --- a/runner/compbio/data/_structure/JnetAnnotation.java +++ b/runner/compbio/data/_structure/JnetAnnotation.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/data/_structure/JpredAnnotation.java b/runner/compbio/data/_structure/JpredAnnotation.java index e4631c6..e78ba27 100644 --- a/runner/compbio/data/_structure/JpredAnnotation.java +++ b/runner/compbio/data/_structure/JpredAnnotation.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/data/_structure/JpredResult.java b/runner/compbio/data/_structure/JpredResult.java index bc32950..07c2c49 100644 --- a/runner/compbio/data/_structure/JpredResult.java +++ b/runner/compbio/data/_structure/JpredResult.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/BlastBlastComparator.java b/runner/compbio/pipeline/_jpred/BlastBlastComparator.java index 655dceb..bd28470 100644 --- a/runner/compbio/pipeline/_jpred/BlastBlastComparator.java +++ b/runner/compbio/pipeline/_jpred/BlastBlastComparator.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java b/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java index fbd04d9..28c64d4 100644 --- a/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java +++ b/runner/compbio/pipeline/_jpred/BlastHmmerComparator.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/BlastParser.java b/runner/compbio/pipeline/_jpred/BlastParser.java index 7ed0d50..45f0244 100644 --- a/runner/compbio/pipeline/_jpred/BlastParser.java +++ b/runner/compbio/pipeline/_jpred/BlastParser.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/Hit.java b/runner/compbio/pipeline/_jpred/Hit.java index 6c60c97..5de8e2c 100644 --- a/runner/compbio/pipeline/_jpred/Hit.java +++ b/runner/compbio/pipeline/_jpred/Hit.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java b/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java index 54bfa09..771f3f4 100644 --- a/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java +++ b/runner/compbio/pipeline/_jpred/JackHmmerHitParser.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/Jpred4.java b/runner/compbio/pipeline/_jpred/Jpred4.java index e14fddf..ebb5f09 100644 --- a/runner/compbio/pipeline/_jpred/Jpred4.java +++ b/runner/compbio/pipeline/_jpred/Jpred4.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/PScore.java b/runner/compbio/pipeline/_jpred/PScore.java index 1bd6200..b752a17 100644 --- a/runner/compbio/pipeline/_jpred/PScore.java +++ b/runner/compbio/pipeline/_jpred/PScore.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/pipeline/_jpred/Pairwise.java b/runner/compbio/pipeline/_jpred/Pairwise.java index 13c765d..517f361 100644 --- a/runner/compbio/pipeline/_jpred/Pairwise.java +++ b/runner/compbio/pipeline/_jpred/Pairwise.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/OptionCombinator.java b/runner/compbio/runner/OptionCombinator.java index f9732b0..a19cafa 100644 --- a/runner/compbio/runner/OptionCombinator.java +++ b/runner/compbio/runner/OptionCombinator.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/Util.java b/runner/compbio/runner/Util.java index 41bddd4..8d77864 100644 --- a/runner/compbio/runner/Util.java +++ b/runner/compbio/runner/Util.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_NativeSpecHelper.java b/runner/compbio/runner/_NativeSpecHelper.java index 54ec849..6f4125f 100644 --- a/runner/compbio/runner/_NativeSpecHelper.java +++ b/runner/compbio/runner/_NativeSpecHelper.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_SkeletalCommandBuilder.java b/runner/compbio/runner/_SkeletalCommandBuilder.java index 2c3adac..c8f1373 100644 --- a/runner/compbio/runner/_SkeletalCommandBuilder.java +++ b/runner/compbio/runner/_SkeletalCommandBuilder.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/BlastAll.java b/runner/compbio/runner/_impl/BlastAll.java index 947e240..36a306f 100644 --- a/runner/compbio/runner/_impl/BlastAll.java +++ b/runner/compbio/runner/_impl/BlastAll.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/BlastParameters.java b/runner/compbio/runner/_impl/BlastParameters.java index b5b3bdc..7c1179f 100644 --- a/runner/compbio/runner/_impl/BlastParameters.java +++ b/runner/compbio/runner/_impl/BlastParameters.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/Environment.java b/runner/compbio/runner/_impl/Environment.java index b878ff3..c27b518 100644 --- a/runner/compbio/runner/_impl/Environment.java +++ b/runner/compbio/runner/_impl/Environment.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/Mcl.java b/runner/compbio/runner/_impl/Mcl.java index 4197aca..bb00190 100644 --- a/runner/compbio/runner/_impl/Mcl.java +++ b/runner/compbio/runner/_impl/Mcl.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/NetNglyc.java b/runner/compbio/runner/_impl/NetNglyc.java index 503aa38..cb3729d 100644 --- a/runner/compbio/runner/_impl/NetNglyc.java +++ b/runner/compbio/runner/_impl/NetNglyc.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/OB.java b/runner/compbio/runner/_impl/OB.java index c766371..8d89fea 100644 --- a/runner/compbio/runner/_impl/OB.java +++ b/runner/compbio/runner/_impl/OB.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/PSIBlast.java b/runner/compbio/runner/_impl/PSIBlast.java index 956da20..9ef3bf7 100644 --- a/runner/compbio/runner/_impl/PSIBlast.java +++ b/runner/compbio/runner/_impl/PSIBlast.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/RPSBlast.java b/runner/compbio/runner/_impl/RPSBlast.java index 797fd42..837e4b3 100644 --- a/runner/compbio/runner/_impl/RPSBlast.java +++ b/runner/compbio/runner/_impl/RPSBlast.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/Ronn.java b/runner/compbio/runner/_impl/Ronn.java index aed7db2..8d8720d 100644 --- a/runner/compbio/runner/_impl/Ronn.java +++ b/runner/compbio/runner/_impl/Ronn.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/Runners.java b/runner/compbio/runner/_impl/Runners.java index 9c45eb1..de61e02 100644 --- a/runner/compbio/runner/_impl/Runners.java +++ b/runner/compbio/runner/_impl/Runners.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_impl/Tmhmm2.java b/runner/compbio/runner/_impl/Tmhmm2.java index e14c488..2fce62f 100644 --- a/runner/compbio/runner/_impl/Tmhmm2.java +++ b/runner/compbio/runner/_impl/Tmhmm2.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * Jalview Web Services @version: 2.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/_jpred/_Jpred.java b/runner/compbio/runner/_jpred/_Jpred.java index 8031ce7..6143e56 100644 --- a/runner/compbio/runner/_jpred/_Jpred.java +++ b/runner/compbio/runner/_jpred/_Jpred.java @@ -1,3 +1,20 @@ +/* Copyright (c) 2011 Peter Troshin + * + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 + * + * This library is free software; you can redistribute it and/or modify it under the terms of the + * Apache License version 2 as published by the Apache Software Foundation + * + * This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without + * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache + * License for more details. + * + * A copy of the license is in apache_license.txt. It is also available here: + * @see: http://www.apache.org/licenses/LICENSE-2.0.txt + * + * Any republication or derived work distributed in source code form + * must include this copyright and license notice. + */ package compbio.runner._jpred; public class _Jpred { diff --git a/runner/compbio/runner/conservation/AACon.java b/runner/compbio/runner/conservation/AACon.java index a03dfd7..0f96077 100644 --- a/runner/compbio/runner/conservation/AACon.java +++ b/runner/compbio/runner/conservation/AACon.java @@ -1,15 +1,19 @@ -/* - * Copyright (c) 2009 Peter Troshin JAva Bioinformatics Analysis Web Services - * (JABAWS) @version: 1.0 This library is free software; you can redistribute it - * and/or modify it under the terms of the Apache License version 2 as published - * by the Apache Software Foundation This library is distributed in the hope - * that it will be useful, but WITHOUT ANY WARRANTY; without even the implied - * warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * Apache License for more details. A copy of the license is in - * apache_license.txt. It is also available here: - * @see: http://www.apache.org/licenses/LICENSE-2.0.txt Any republication or - * derived work distributed in source code form must include this copyright and - * license notice. +/* Copyright (c) 2011 Peter Troshin + * + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 + * + * This library is free software; you can redistribute it and/or modify it under the terms of the + * Apache License version 2 as published by the Apache Software Foundation + * + * This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without + * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache + * License for more details. + * + * A copy of the license is in apache_license.txt. It is also available here: + * @see: http://www.apache.org/licenses/LICENSE-2.0.txt + * + * Any republication or derived work distributed in source code form + * must include this copyright and license notice. */ package compbio.runner.conservation; diff --git a/runner/compbio/runner/disorder/Jronn.java b/runner/compbio/runner/disorder/Jronn.java index 5850eaf..55200c2 100644 --- a/runner/compbio/runner/disorder/Jronn.java +++ b/runner/compbio/runner/disorder/Jronn.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/ClustalO.java b/runner/compbio/runner/msa/ClustalO.java index ae0d8ec..e5c93b3 100644 --- a/runner/compbio/runner/msa/ClustalO.java +++ b/runner/compbio/runner/msa/ClustalO.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/ClustalW.java b/runner/compbio/runner/msa/ClustalW.java index f43be73..16b5734 100644 --- a/runner/compbio/runner/msa/ClustalW.java +++ b/runner/compbio/runner/msa/ClustalW.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/Mafft.java b/runner/compbio/runner/msa/Mafft.java index e4d139d..86c7599 100644 --- a/runner/compbio/runner/msa/Mafft.java +++ b/runner/compbio/runner/msa/Mafft.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/Muscle.java b/runner/compbio/runner/msa/Muscle.java index 1d3b827..e627462 100644 --- a/runner/compbio/runner/msa/Muscle.java +++ b/runner/compbio/runner/msa/Muscle.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/Probcons.java b/runner/compbio/runner/msa/Probcons.java index 58e4adb..3d0f86a 100644 --- a/runner/compbio/runner/msa/Probcons.java +++ b/runner/compbio/runner/msa/Probcons.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation diff --git a/runner/compbio/runner/msa/Tcoffee.java b/runner/compbio/runner/msa/Tcoffee.java index d6dd3fe..0c76d21 100644 --- a/runner/compbio/runner/msa/Tcoffee.java +++ b/runner/compbio/runner/msa/Tcoffee.java @@ -1,6 +1,6 @@ -/* Copyright (c) 2009 Peter Troshin +/* Copyright (c) 2011 Peter Troshin * - * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0 + * JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0 * * This library is free software; you can redistribute it and/or modify it under the terms of the * Apache License version 2 as published by the Apache Software Foundation -- 1.7.10.2