From: Charles Ofoegbu Date: Tue, 9 Dec 2014 12:57:13 +0000 (+0000) Subject: first commit X-Git-Url: http://source.jalview.org/gitweb/?p=jalview-fx.git;a=commitdiff_plain;h=f0f50dfd733f1505e574d0ecc5f641c2bb67127b;ds=sidebyside first commit --- f0f50dfd733f1505e574d0ecc5f641c2bb67127b diff --git a/.classpath b/.classpath new file mode 100644 index 0000000..f31644d --- /dev/null +++ b/.classpath @@ -0,0 +1,43 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..496a69c --- /dev/null +++ b/.gitignore @@ -0,0 +1,8 @@ +.project +/bin +/build +.DS_Store +/.com.apple.timemachine.supported +.gitattributes + + diff --git a/build.fxbuild b/build.fxbuild new file mode 100644 index 0000000..b7ddfb0 --- /dev/null +++ b/build.fxbuild @@ -0,0 +1,8 @@ + + + + + + + + diff --git a/lib/JGoogleAnalytics_0.3.jar b/lib/JGoogleAnalytics_0.3.jar new file mode 100644 index 0000000..0dbc98c Binary files /dev/null and b/lib/JGoogleAnalytics_0.3.jar differ diff --git a/lib/Jmol-12.2.4.jar b/lib/Jmol-12.2.4.jar new file mode 100644 index 0000000..f1254cd Binary files /dev/null and b/lib/Jmol-12.2.4.jar differ diff --git a/lib/VARNAv3-91.jar b/lib/VARNAv3-91.jar new file mode 100644 index 0000000..edfbca5 Binary files /dev/null and b/lib/VARNAv3-91.jar differ diff --git a/lib/activation.jar b/lib/activation.jar new file mode 100755 index 0000000..a064ef8 Binary files /dev/null and b/lib/activation.jar differ diff --git a/lib/apache-mime4j-0.6.jar b/lib/apache-mime4j-0.6.jar new file mode 100644 index 0000000..1d2282c Binary files /dev/null and b/lib/apache-mime4j-0.6.jar differ diff --git a/lib/axis.jar b/lib/axis.jar new file mode 100755 index 0000000..90bb798 Binary files /dev/null and b/lib/axis.jar differ diff --git a/lib/castor-1.1-cycle-xml.jar b/lib/castor-1.1-cycle-xml.jar new file mode 100644 index 0000000..1cfc700 Binary files /dev/null and b/lib/castor-1.1-cycle-xml.jar differ diff --git a/lib/commons-codec-1.3.jar b/lib/commons-codec-1.3.jar new file mode 100644 index 0000000..957b675 Binary files /dev/null and b/lib/commons-codec-1.3.jar differ diff --git a/lib/commons-discovery.jar b/lib/commons-discovery.jar new file mode 100755 index 0000000..b885548 Binary files /dev/null and b/lib/commons-discovery.jar differ diff --git a/lib/commons-logging-1.1.1.jar b/lib/commons-logging-1.1.1.jar new file mode 100644 index 0000000..1deef14 Binary files /dev/null and b/lib/commons-logging-1.1.1.jar differ diff --git a/lib/fxgraphics2d-1.1.jar b/lib/fxgraphics2d-1.1.jar new file mode 100644 index 0000000..29b059b Binary files /dev/null and b/lib/fxgraphics2d-1.1.jar differ diff --git a/lib/groovy-all-1.8.2.jar b/lib/groovy-all-1.8.2.jar new file mode 100644 index 0000000..85af249 Binary files /dev/null and b/lib/groovy-all-1.8.2.jar differ diff --git a/lib/httpclient-4.0.3.jar b/lib/httpclient-4.0.3.jar new file mode 100644 index 0000000..fd0d377 Binary files /dev/null and b/lib/httpclient-4.0.3.jar differ diff --git a/lib/httpcore-4.0.1.jar b/lib/httpcore-4.0.1.jar new file mode 100644 index 0000000..4aef35e Binary files /dev/null and b/lib/httpcore-4.0.1.jar differ diff --git a/lib/httpmime-4.0.3.jar b/lib/httpmime-4.0.3.jar new file mode 100644 index 0000000..0dfd331 Binary files /dev/null and b/lib/httpmime-4.0.3.jar differ diff --git a/lib/jalview.jar b/lib/jalview.jar new file mode 100644 index 0000000..4d13f38 Binary files /dev/null and b/lib/jalview.jar differ diff --git a/lib/jaxrpc.jar b/lib/jaxrpc.jar new file mode 100755 index 0000000..ebd457b Binary files /dev/null and b/lib/jaxrpc.jar differ diff --git a/lib/jdas-1.0.4.jar b/lib/jdas-1.0.4.jar new file mode 100644 index 0000000..fb5d128 Binary files /dev/null and b/lib/jdas-1.0.4.jar differ diff --git a/lib/jfreesvg-2.1.jar b/lib/jfreesvg-2.1.jar new file mode 100644 index 0000000..91d453c Binary files /dev/null and b/lib/jfreesvg-2.1.jar differ diff --git a/lib/jfxrt.jar b/lib/jfxrt.jar new file mode 100644 index 0000000..5646ed7 Binary files /dev/null and b/lib/jfxrt.jar differ diff --git a/lib/jhall.jar b/lib/jhall.jar new file mode 100755 index 0000000..ff08af0 Binary files /dev/null and b/lib/jhall.jar differ diff --git a/lib/json_simple-1.1.jar b/lib/json_simple-1.1.jar new file mode 100644 index 0000000..f395f41 Binary files /dev/null and b/lib/json_simple-1.1.jar differ diff --git a/lib/jsoup-1.8.1.jar b/lib/jsoup-1.8.1.jar new file mode 100644 index 0000000..ae717d4 Binary files /dev/null and b/lib/jsoup-1.8.1.jar differ diff --git a/lib/jswingreader-0.3.jar b/lib/jswingreader-0.3.jar new file mode 100644 index 0000000..c632130 Binary files /dev/null and b/lib/jswingreader-0.3.jar differ diff --git a/lib/log4j-to-slf4j-2.0-rc2.jar b/lib/log4j-to-slf4j-2.0-rc2.jar new file mode 100644 index 0000000..4bbf54a Binary files /dev/null and b/lib/log4j-to-slf4j-2.0-rc2.jar differ diff --git a/lib/mail.jar b/lib/mail.jar new file mode 100755 index 0000000..5b40acf Binary files /dev/null and b/lib/mail.jar differ diff --git a/lib/miglayout-4.0-swing.jar b/lib/miglayout-4.0-swing.jar new file mode 100644 index 0000000..7b6a22c Binary files /dev/null and b/lib/miglayout-4.0-swing.jar differ diff --git a/lib/min-jabaws-client-2.1.0.jar b/lib/min-jabaws-client-2.1.0.jar new file mode 100644 index 0000000..7ad030a Binary files /dev/null and b/lib/min-jabaws-client-2.1.0.jar differ diff --git a/lib/regex.jar b/lib/regex.jar new file mode 100755 index 0000000..3e29d22 Binary files /dev/null and b/lib/regex.jar differ diff --git a/lib/saaj.jar b/lib/saaj.jar new file mode 100755 index 0000000..fcdd67d Binary files /dev/null and b/lib/saaj.jar differ diff --git a/lib/slf4j-api-1.7.7.jar b/lib/slf4j-api-1.7.7.jar new file mode 100644 index 0000000..b28e220 Binary files /dev/null and b/lib/slf4j-api-1.7.7.jar differ diff --git a/lib/slf4j-log4j12-1.7.7.jar b/lib/slf4j-log4j12-1.7.7.jar new file mode 100644 index 0000000..12c804e Binary files /dev/null and b/lib/slf4j-log4j12-1.7.7.jar differ diff --git a/lib/spring-core-3.0.5.RELEASE.jar b/lib/spring-core-3.0.5.RELEASE.jar new file mode 100644 index 0000000..ea9500d Binary files /dev/null and b/lib/spring-core-3.0.5.RELEASE.jar differ diff --git a/lib/spring-web-3.0.5.RELEASE.jar b/lib/spring-web-3.0.5.RELEASE.jar new file mode 100644 index 0000000..5a2381a Binary files /dev/null and b/lib/spring-web-3.0.5.RELEASE.jar differ diff --git a/lib/vamsas-client.jar b/lib/vamsas-client.jar new file mode 100644 index 0000000..2634954 Binary files /dev/null and b/lib/vamsas-client.jar differ diff --git a/lib/wsdl4j.jar b/lib/wsdl4j.jar new file mode 100755 index 0000000..e6c862a Binary files /dev/null and b/lib/wsdl4j.jar differ diff --git a/lib/xercesImpl.jar b/lib/xercesImpl.jar new file mode 100755 index 0000000..0aaa990 Binary files /dev/null and b/lib/xercesImpl.jar differ diff --git a/lib/xml-apis.jar b/lib/xml-apis.jar new file mode 100755 index 0000000..4673346 Binary files /dev/null and b/lib/xml-apis.jar differ diff --git a/resources/fxml/AlignmentView.fxml b/resources/fxml/AlignmentView.fxml new file mode 100644 index 0000000..904b235 --- /dev/null +++ b/resources/fxml/AlignmentView.fxml @@ -0,0 +1,17 @@ + + + + + + + + +

+ diff --git a/resources/fxml/Desktop copy.fxml b/resources/fxml/Desktop copy.fxml new file mode 100644 index 0000000..1c8bf9a --- /dev/null +++ b/resources/fxml/Desktop copy.fxml @@ -0,0 +1,92 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/resources/fxml/Desktop.fxml b/resources/fxml/Desktop.fxml new file mode 100644 index 0000000..9511a0d --- /dev/null +++ b/resources/fxml/Desktop.fxml @@ -0,0 +1,81 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/resources/fxml/HelloWorld.fxml b/resources/fxml/HelloWorld.fxml new file mode 100644 index 0000000..682cd8a --- /dev/null +++ b/resources/fxml/HelloWorld.fxml @@ -0,0 +1,54 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

+ + + + + + + + + diff --git a/resources/fxml/MainContainer.fxml b/resources/fxml/MainContainer.fxml new file mode 100644 index 0000000..5b27dc2 --- /dev/null +++ b/resources/fxml/MainContainer.fxml @@ -0,0 +1,82 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/resources/fxml/MainMenu.fxml b/resources/fxml/MainMenu.fxml new file mode 100644 index 0000000..5a6fe2d --- /dev/null +++ b/resources/fxml/MainMenu.fxml @@ -0,0 +1,51 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/resources/fxml/TestUI.fxml b/resources/fxml/TestUI.fxml new file mode 100644 index 0000000..47b7397 --- /dev/null +++ b/resources/fxml/TestUI.fxml @@ -0,0 +1,50 @@ + + + + + + + + + + + + + +