Open the {\sl Selection $\Rightarrow$ Edit New Group $\Rightarrow$ Group Colour
} menu and select {\sl Percentage Identity}.
This will turn the selected region into a group and colour it accordingly.}
-\exstep{Hold down [CTRL] ([CMD] on Mac) or [SHIFT] and use the mouse to select and deselect sequences in
+\exstep{Hold down [CTRL] ([CMD] on Mac) and use the mouse to select and deselect sequences in
the alignment by clicking on their Sequence ID label. Note how the group expands
to include newly selected sequences, and the Percentage Identity colouring changes. }
-\exstep{ Another way to resize the group is by using the mouse to click and drag
+\exstep{ Another way to resize the group is simply to use the mouse to click and drag
the right-hand edge of the selected group.}
\exstep{The current selection can be exported and saved, place mouse on the text
}
\exstep{Repeat the above using columns to hide and reveal columns
instead of sequences.}
-\exstep{Select a region of the alignment, and experiment with the {\sl Hide all
-but selected region} option. In the alignment window menu, {\sl View $\Rightarrow$ Hide $\Rightarrow$ All
-but selected region.}} \exstep{Select some sequences, pick one to represent the rest by hovering
+\exstep{Select a region of the alignment, and experiment with {\sl View $\Rightarrow$ Hide $\Rightarrow$ Hide all
+but selected region} and {\sl View $\Rightarrow$ Hide $\Rightarrow$ All
+but selected region} options in the alignment window menu.} \exstep{Select some sequences, pick one to represent the rest by hovering
the mouse over this sequence. Bring up the Sequence ID context menu by right
clicking and select {\sl (Sequence ID name) $\Rightarrow$ Represent group
with (Sequence ID name )}. To reveal these hidden sequences, right click on the
git://source.jalview.org / jalview-manual.git / blobdiff