/* * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.api; import jalview.datamodel.SequenceGroup; import jalview.datamodel.SequenceI; import jalview.renderer.seqfeatures.FeatureColourFinder; import java.awt.Color; import java.awt.Graphics; public interface SequenceRenderer { Color getResidueColour(SequenceI seq, int position, FeatureColourFinder finder); /** * Configure the Graphics canvas and render options for the renderer * * @param g * - the canvas to render to * @param renderGaps * - when true, gap characters will be included when rendered * */ void prepare(Graphics g, boolean renderGaps); void drawSequence(SequenceI nextSeq, SequenceGroup[] findAllGroups, int startRes, int endRes, int i); void drawHighlightedText(SequenceI nextSeq, int i, int j, int k, int l); void drawCursor(Graphics g, char s, int i, int j); }