/* * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1) * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; /** * Class Setting. * * @version $Revision$ $Date$ */ public class Setting implements java.io.Serializable { // --------------------------/ // - Class/Member Variables -/ // --------------------------/ /** * Field _type. */ private java.lang.String _type; /** * Field _colour. */ private int _colour; /** * keeps track of state for field: _colour */ private boolean _has_colour; /** * Field _display. */ private boolean _display; /** * keeps track of state for field: _display */ private boolean _has_display; /** * Field _order. */ private float _order; /** * keeps track of state for field: _order */ private boolean _has_order; /** * Optional minimum colour for graduated feature colour * */ private int _mincolour; /** * keeps track of state for field: _mincolour */ private boolean _has_mincolour; /** * threshold value for graduated feature colour * */ private float _threshold; /** * keeps track of state for field: _threshold */ private boolean _has_threshold; /** * threshold type for graduated feature colour * */ private int _threshstate; /** * keeps track of state for field: _threshstate */ private boolean _has_threshstate; /** * Field _max. */ private float _max; /** * keeps track of state for field: _max */ private boolean _has_max; /** * Field _min. */ private float _min; /** * keeps track of state for field: _min */ private boolean _has_min; /** * Field _colourByLabel. */ private boolean _colourByLabel; /** * keeps track of state for field: _colourByLabel */ private boolean _has_colourByLabel; /** * Field _autoScale. */ private boolean _autoScale; /** * keeps track of state for field: _autoScale */ private boolean _has_autoScale; // ----------------/ // - Constructors -/ // ----------------/ public Setting() { super(); } // -----------/ // - Methods -/ // -----------/ /** */ public void deleteAutoScale() { this._has_autoScale = false; } /** */ public void deleteColour() { this._has_colour = false; } /** */ public void deleteColourByLabel() { this._has_colourByLabel = false; } /** */ public void deleteDisplay() { this._has_display = false; } /** */ public void deleteMax() { this._has_max = false; } /** */ public void deleteMin() { this._has_min = false; } /** */ public void deleteMincolour() { this._has_mincolour = false; } /** */ public void deleteOrder() { this._has_order = false; } /** */ public void deleteThreshold() { this._has_threshold = false; } /** */ public void deleteThreshstate() { this._has_threshstate = false; } /** * Returns the value of field 'autoScale'. * * @return the value of field 'AutoScale'. */ public boolean getAutoScale() { return this._autoScale; } /** * Returns the value of field 'colour'. * * @return the value of field 'Colour'. */ public int getColour() { return this._colour; } /** * Returns the value of field 'colourByLabel'. * * @return the value of field 'ColourByLabel'. */ public boolean getColourByLabel() { return this._colourByLabel; } /** * Returns the value of field 'display'. * * @return the value of field 'Display'. */ public boolean getDisplay() { return this._display; } /** * Returns the value of field 'max'. * * @return the value of field 'Max'. */ public float getMax() { return this._max; } /** * Returns the value of field 'min'. * * @return the value of field 'Min'. */ public float getMin() { return this._min; } /** * Returns the value of field 'mincolour'. The field 'mincolour' has the * following description: Optional minimum colour for graduated feature colour * * * @return the value of field 'Mincolour'. */ public int getMincolour() { return this._mincolour; } /** * Returns the value of field 'order'. * * @return the value of field 'Order'. */ public float getOrder() { return this._order; } /** * Returns the value of field 'threshold'. The field 'threshold' has the * following description: threshold value for graduated feature colour * * * @return the value of field 'Threshold'. */ public float getThreshold() { return this._threshold; } /** * Returns the value of field 'threshstate'. The field 'threshstate' has the * following description: threshold type for graduated feature colour * * * @return the value of field 'Threshstate'. */ public int getThreshstate() { return this._threshstate; } /** * Returns the value of field 'type'. * * @return the value of field 'Type'. */ public java.lang.String getType() { return this._type; } /** * Method hasAutoScale. * * @return true if at least one AutoScale has been added */ public boolean hasAutoScale() { return this._has_autoScale; } /** * Method hasColour. * * @return true if at least one Colour has been added */ public boolean hasColour() { return this._has_colour; } /** * Method hasColourByLabel. * * @return true if at least one ColourByLabel has been added */ public boolean hasColourByLabel() { return this._has_colourByLabel; } /** * Method hasDisplay. * * @return true if at least one Display has been added */ public boolean hasDisplay() { return this._has_display; } /** * Method hasMax. * * @return true if at least one Max has been added */ public boolean hasMax() { return this._has_max; } /** * Method hasMin. * * @return true if at least one Min has been added */ public boolean hasMin() { return this._has_min; } /** * Method hasMincolour. * * @return true if at least one Mincolour has been added */ public boolean hasMincolour() { return this._has_mincolour; } /** * Method hasOrder. * * @return true if at least one Order has been added */ public boolean hasOrder() { return this._has_order; } /** * Method hasThreshold. * * @return true if at least one Threshold has been added */ public boolean hasThreshold() { return this._has_threshold; } /** * Method hasThreshstate. * * @return true if at least one Threshstate has been added */ public boolean hasThreshstate() { return this._has_threshstate; } /** * Returns the value of field 'autoScale'. * * @return the value of field 'AutoScale'. */ public boolean isAutoScale() { return this._autoScale; } /** * Returns the value of field 'colourByLabel'. * * @return the value of field 'ColourByLabel'. */ public boolean isColourByLabel() { return this._colourByLabel; } /** * Returns the value of field 'display'. * * @return the value of field 'Display'. */ public boolean isDisplay() { return this._display; } /** * Method isValid. * * @return true if this object is valid according to the schema */ public boolean isValid() { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } /** * * * @param out * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema */ public void marshal(final java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } /** * * * @param handler * @throws java.io.IOException * if an IOException occurs during marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling */ public void marshal(final org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } /** * Sets the value of field 'autoScale'. * * @param autoScale * the value of field 'autoScale'. */ public void setAutoScale(final boolean autoScale) { this._autoScale = autoScale; this._has_autoScale = true; } /** * Sets the value of field 'colour'. * * @param colour * the value of field 'colour'. */ public void setColour(final int colour) { this._colour = colour; this._has_colour = true; } /** * Sets the value of field 'colourByLabel'. * * @param colourByLabel * the value of field 'colourByLabel'. */ public void setColourByLabel(final boolean colourByLabel) { this._colourByLabel = colourByLabel; this._has_colourByLabel = true; } /** * Sets the value of field 'display'. * * @param display * the value of field 'display'. */ public void setDisplay(final boolean display) { this._display = display; this._has_display = true; } /** * Sets the value of field 'max'. * * @param max * the value of field 'max'. */ public void setMax(final float max) { this._max = max; this._has_max = true; } /** * Sets the value of field 'min'. * * @param min * the value of field 'min'. */ public void setMin(final float min) { this._min = min; this._has_min = true; } /** * Sets the value of field 'mincolour'. The field 'mincolour' has the * following description: Optional minimum colour for graduated feature colour * * * @param mincolour * the value of field 'mincolour'. */ public void setMincolour(final int mincolour) { this._mincolour = mincolour; this._has_mincolour = true; } /** * Sets the value of field 'order'. * * @param order * the value of field 'order'. */ public void setOrder(final float order) { this._order = order; this._has_order = true; } /** * Sets the value of field 'threshold'. The field 'threshold' has the * following description: threshold value for graduated feature colour * * * @param threshold * the value of field 'threshold'. */ public void setThreshold(final float threshold) { this._threshold = threshold; this._has_threshold = true; } /** * Sets the value of field 'threshstate'. The field 'threshstate' has the * following description: threshold type for graduated feature colour * * * @param threshstate * the value of field 'threshstate'. */ public void setThreshstate(final int threshstate) { this._threshstate = threshstate; this._has_threshstate = true; } /** * Sets the value of field 'type'. * * @param type * the value of field 'type'. */ public void setType(final java.lang.String type) { this._type = type; } /** * Method unmarshal. * * @param reader * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema * @return the unmarshaled jalview.schemabinding.version2.Settin */ public static jalview.schemabinding.version2.Setting unmarshal( final java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.schemabinding.version2.Setting) Unmarshaller.unmarshal( jalview.schemabinding.version2.Setting.class, reader); } /** * * * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema */ public void validate() throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } }