X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-blossom.html;fp=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-blossom.html;h=08ca8a6d39a289a8d66ff3ddcb55cbbd4726fdeb;hp=0000000000000000000000000000000000000000;hb=4ad2441df1220e3b1133feb3f70f00ba8b28392f;hpb=ff53886d39b564effa812300e0a9b32c95deb957 diff --git a/help/help/html/colourSchemes/gecos-blossom.html b/help/help/html/colourSchemes/gecos-blossom.html new file mode 100755 index 0000000..08ca8a6 --- /dev/null +++ b/help/help/html/colourSchemes/gecos-blossom.html @@ -0,0 +1,83 @@ + + + +Blossom Colour Scheme + + + + +

+ Blossom +

+

+ This colour scheme was generated by the gecos software. See
+ Kunzmann, P., Mayer, B.E. & Hamacher, K. Substitution matrix based color schemes for sequence alignment visualization. BMC Bioinformatics 21, 209 (2020). https://doi.org/10.1186/s12859-020-3526-6
+ and https://gecos.biotite-python.org/ .
+ Gecos sets perceptual differences in the colour scheme according to differences in the substitution matrix. +

+

+ blossom is a light color scheme with high contrast, based on BLOSUM62. +

+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
ACDE
FGHI
KLMN
PQRS
TVWY
+
+ +