X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-flower.html;fp=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-flower.html;h=94452e835edf65efbe44cd5e9f6807be71a84925;hp=0000000000000000000000000000000000000000;hb=4ad2441df1220e3b1133feb3f70f00ba8b28392f;hpb=ff53886d39b564effa812300e0a9b32c95deb957 diff --git a/help/help/html/colourSchemes/gecos-flower.html b/help/help/html/colourSchemes/gecos-flower.html new file mode 100755 index 0000000..94452e8 --- /dev/null +++ b/help/help/html/colourSchemes/gecos-flower.html @@ -0,0 +1,83 @@ + + +
++ Flower +
+
+ This colour scheme was generated by the gecos software. See
+ Kunzmann, P., Mayer, B.E. & Hamacher, K. Substitution matrix based color schemes for sequence alignment visualization. BMC Bioinformatics 21, 209 (2020). https://doi.org/10.1186/s12859-020-3526-6
+ and https://gecos.biotite-python.org/ .
+ Gecos sets perceptual differences in the colour scheme according to differences in the substitution matrix.
+
+ flower is a light color scheme, based on BLOSUM62. +
+A | +C | +D | +E | +
F | +G | +H | +I | +
K | +L | +M | +N | +
P | +Q | +R | +S | +
T | +V | +W | +Y | +