X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fext%2Ftreeviewer%2FExternalTreeBuilderI.java;fp=src%2Fjalview%2Fext%2Ftreeviewer%2FExternalTreeBuilderI.java;h=8fd1d1da4c57a1d1336699fd6427b213a66ffea6;hp=0000000000000000000000000000000000000000;hb=f96e6a945e2df8a844f428c08cfc08210d937fc0;hpb=11346f873e4ecb2d191499fd1d52b8de07a65bf3

diff --git a/src/jalview/ext/treeviewer/ExternalTreeBuilderI.java b/src/jalview/ext/treeviewer/ExternalTreeBuilderI.java
new file mode 100644
index 0000000..8fd1d1d
--- /dev/null
+++ b/src/jalview/ext/treeviewer/ExternalTreeBuilderI.java
@@ -0,0 +1,31 @@
+package jalview.ext.treeviewer;
+
+import jalview.datamodel.SequenceI;
+
+import java.util.Map;
+
+/**
+ * Note that this will take anything as a Tree or TreeNode object as no
+ * assumptions can be made about the inheritance structure of Tree or TreeNode
+ * (besides being Objects).
+ * 
+ * @author kjvanderheide
+ *
+ * @param <T>
+ *          Tree object that the tree viewer requires.
+ * @param <N>
+ *          Tree node object that the tree viewer requires.
+ */
+public interface ExternalTreeBuilderI<T, N>
+{
+  public T buildTree(N treeRoot);
+
+  public T buildTree();
+
+  public Map<SequenceI, N> getAlignmentBoundNodes();
+
+  public Map<N, SequenceI> getNodesBoundAlignment();
+
+  public String generateTreeName();
+
+}