X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFeaturesFile.java;fp=src%2Fjalview%2Fio%2FFeaturesFile.java;h=48eeee38286fc7e3fad4d09cd78268045489cf93;hp=6af0cdf51be49e4974ea3f499367db10d92bb14f;hb=e6e92a1314a7b7557401b829846ac55dcffbfbe2;hpb=e77ec70cef4efba54974739e86673925396f0e92 diff --git a/src/jalview/io/FeaturesFile.java b/src/jalview/io/FeaturesFile.java index 6af0cdf..48eeee3 100755 --- a/src/jalview/io/FeaturesFile.java +++ b/src/jalview/io/FeaturesFile.java @@ -35,11 +35,12 @@ import jalview.io.gff.GffHelperBase; import jalview.io.gff.GffHelperFactory; import jalview.io.gff.GffHelperI; import jalview.schemes.FeatureColour; -import jalview.schemes.UserColourScheme; +import jalview.util.ColorUtils; import jalview.util.MapList; import jalview.util.ParseHtmlBodyAndLinks; import jalview.util.StringUtils; +import java.awt.Color; import java.io.IOException; import java.util.ArrayList; import java.util.Arrays; @@ -355,8 +356,8 @@ public class FeaturesFile extends AlignFile implements FeaturesSourceI * Perhaps an old style groups file with no colours - * synthesize a colour from the feature type */ - UserColourScheme ucs = new UserColourScheme(ft); - featureColours.put(ft, new FeatureColour(ucs.findColour('A'))); + Color colour = ColorUtils.createColourFromName(ft); + featureColours.put(ft, new FeatureColour(colour)); } SequenceFeature sf = new SequenceFeature(ft, desc, "", startPos, endPos, featureGroup);